RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 CMAHPQ9Y471 501 aa17.43■□□□□ 0.38
PDLIM1-202ENST00000477757 UPK3AO75631 287 aa17.42■□□□□ 0.38
PDLIM1-202ENST00000477757 EVX1P49640 407 aa17.42■□□□□ 0.38
PDLIM1-202ENST00000477757 P2RY4P51582 365 aa17.42■□□□□ 0.38
PDLIM1-202ENST00000477757 UBA52P62987 128 aaKnown RBP17.42■□□□□ 0.38
PDLIM1-202ENST00000477757 CKAP4Q07065 602 aaKnown RBP17.42■□□□□ 0.38
PDLIM1-202ENST00000477757 FOXL1Q12952 345 aa17.42■□□□□ 0.38
PDLIM1-202ENST00000477757 DAG1Q14118 895 aa17.42■□□□□ 0.38
PDLIM1-202ENST00000477757 OR7A5Q15622 319 aa17.42■□□□□ 0.38
PDLIM1-202ENST00000477757 MIDNQ504T8 468 aa17.42■□□□□ 0.38
PDLIM1-202ENST00000477757 XKR7Q5GH72 579 aa17.42■□□□□ 0.38
PDLIM1-202ENST00000477757 HMGN2P46Q86SG4 172 aa17.42■□□□□ 0.38
PDLIM1-202ENST00000477757 HOMEZQ8IX15 550 aa17.42■□□□□ 0.38
PDLIM1-202ENST00000477757 CNPY4Q8N129 248 aa17.42■□□□□ 0.38
PDLIM1-202ENST00000477757 CLEC4FQ8N1N0 589 aa17.42■□□□□ 0.38
PDLIM1-202ENST00000477757 CNOT9Q92600 299 aaKnown RBP17.42■□□□□ 0.38
PDLIM1-202ENST00000477757 RDH5Q92781 318 aa17.42■□□□□ 0.38
PDLIM1-202ENST00000477757 ZG16BQ96DA0 208 aa17.42■□□□□ 0.38
PDLIM1-202ENST00000477757 C1orf50Q9BV19 199 aa17.42■□□□□ 0.38
PDLIM1-202ENST00000477757 DUSP26Q9BV47 211 aa17.42■□□□□ 0.38
PDLIM1-202ENST00000477757 LINC00470Q9BZP3 86 aa17.42■□□□□ 0.38
PDLIM1-202ENST00000477757 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.42■□□□□ 0.38
PDLIM1-202ENST00000477757 REV1Q9UBZ9 1251 aa17.42■□□□□ 0.38
PDLIM1-202ENST00000477757 NOTCH1P46531 2555 aa17.41■□□□□ 0.38
PDLIM1-202ENST00000477757 TMEM233B4DJY2 109 aa17.41■□□□□ 0.38
PDLIM1-202ENST00000477757 FAAHO00519 579 aa17.41■□□□□ 0.38
PDLIM1-202ENST00000477757 HPXP02790 462 aa17.41■□□□□ 0.38
PDLIM1-202ENST00000477757 CPA3P15088 417 aa17.41■□□□□ 0.38
PDLIM1-202ENST00000477757 PRPS1L1P21108 318 aa17.41■□□□□ 0.38
PDLIM1-202ENST00000477757 ARR3P36575 388 aa17.41■□□□□ 0.38
PDLIM1-202ENST00000477757 ROR2Q01974 943 aaKnown RBP17.41■□□□□ 0.38
PDLIM1-202ENST00000477757 MSMPQ1L6U9 139 aa17.41■□□□□ 0.38
PDLIM1-202ENST00000477757 UGT3A2Q3SY77 523 aa17.41■□□□□ 0.38
PDLIM1-202ENST00000477757 ATAD3BQ5T9A4 648 aa17.41■□□□□ 0.38
PDLIM1-202ENST00000477757 REP15Q6BDI9 236 aa17.41■□□□□ 0.38
PDLIM1-202ENST00000477757 KRT80Q6KB66 452 aa17.41■□□□□ 0.38
PDLIM1-202ENST00000477757 CREB3L2Q70SY1 520 aa17.41■□□□□ 0.38
PDLIM1-202ENST00000477757 ROPN1LQ96C74 230 aa17.41■□□□□ 0.38
PDLIM1-202ENST00000477757 MRPL37Q9BZE1 423 aaKnown RBP17.41■□□□□ 0.38
PDLIM1-202ENST00000477757 ZNF275Q9NSD4 429 aaPredicted RBP17.41■□□□□ 0.38
PDLIM1-202ENST00000477757 A0A1W2PPM1 405 aa17.4■□□□□ 0.38
PDLIM1-202ENST00000477757 ZNF503-AS2A6NEH8 195 aa17.4■□□□□ 0.38
PDLIM1-202ENST00000477757 PEX11AO75192 247 aa17.4■□□□□ 0.38
PDLIM1-202ENST00000477757 VAMP5O95183 116 aa17.4■□□□□ 0.38
PDLIM1-202ENST00000477757 OR12D1P0DN82 309 aa17.4■□□□□ 0.38
PDLIM1-202ENST00000477757 HKR1P10072 659 aa17.4■□□□□ 0.38
PDLIM1-202ENST00000477757 COL8A2P25067 703 aa17.4■□□□□ 0.38
PDLIM1-202ENST00000477757 TMEM33P57088 247 aa17.4■□□□□ 0.38
PDLIM1-202ENST00000477757 MRPS11P82912 194 aaKnown RBP17.4■□□□□ 0.38
PDLIM1-202ENST00000477757 NPRL3Q12980 569 aa17.4■□□□□ 0.38
PDLIM1-202ENST00000477757 TMEM225Q6GV28 225 aa17.4■□□□□ 0.38
PDLIM1-202ENST00000477757 NIPAL3Q6P499 406 aa17.4■□□□□ 0.38
PDLIM1-202ENST00000477757 CMIPQ8IY22 773 aa17.4■□□□□ 0.38
PDLIM1-202ENST00000477757 CLECL1Q8IZS7 167 aa17.4■□□□□ 0.38
PDLIM1-202ENST00000477757 BPIFB2Q8N4F0 458 aa17.4■□□□□ 0.38
PDLIM1-202ENST00000477757 ANKK1Q8NFD2 765 aa17.4■□□□□ 0.38
PDLIM1-202ENST00000477757 IL17RDQ8NFM7 739 aa17.4■□□□□ 0.38
PDLIM1-202ENST00000477757 TMPRSS13Q9BYE2 586 aa17.4■□□□□ 0.38
PDLIM1-202ENST00000477757 MS4A5Q9H3V2 200 aa17.4■□□□□ 0.38
PDLIM1-202ENST00000477757 SLC52A3Q9NQ40 469 aa17.4■□□□□ 0.38
PDLIM1-202ENST00000477757 CMYA5Q8N3K9 4069 aa17.4■□□□□ 0.38
PDLIM1-202ENST00000477757 RPL36A-HNRNPH2H7BZ11 118 aa17.39■□□□□ 0.37
PDLIM1-202ENST00000477757 BCL10O95999 233 aa17.39■□□□□ 0.37
PDLIM1-202ENST00000477757 FGF4P08620 206 aa17.39■□□□□ 0.37
PDLIM1-202ENST00000477757 NR4A1P22736 598 aa17.39■□□□□ 0.37
PDLIM1-202ENST00000477757 ARF1P84077 181 aaKnown RBP17.39■□□□□ 0.37
PDLIM1-202ENST00000477757 MYBPC1Q00872 1141 aa17.39■□□□□ 0.37
PDLIM1-202ENST00000477757 TNFAIP8L2Q6P589 184 aaPredicted RBP17.39■□□□□ 0.37
PDLIM1-202ENST00000477757 EPHX4Q8IUS5 362 aa17.39■□□□□ 0.37
PDLIM1-202ENST00000477757 RIBC1Q8N443 379 aaPredicted RBP17.39■□□□□ 0.37
PDLIM1-202ENST00000477757 CCDC63Q8NA47 563 aa17.39■□□□□ 0.37
PDLIM1-202ENST00000477757 XAGE5Q8WWM1 108 aa17.39■□□□□ 0.37
PDLIM1-202ENST00000477757 RAB8BQ92930 207 aa17.39■□□□□ 0.37
PDLIM1-202ENST00000477757 YIPF5Q969M3 257 aa17.39■□□□□ 0.37
PDLIM1-202ENST00000477757 ZNF416Q9BWM5 594 aa17.39■□□□□ 0.37
PDLIM1-202ENST00000477757 GATA5Q9BWX5 397 aaPredicted RBP17.39■□□□□ 0.37
PDLIM1-202ENST00000477757 CRLF2Q9HC73 371 aa17.39■□□□□ 0.37
PDLIM1-202ENST00000477757 ADPRHL2Q9NX46 363 aa17.39■□□□□ 0.37
PDLIM1-202ENST00000477757 TBK1Q9UHD2 729 aa17.39■□□□□ 0.37
PDLIM1-202ENST00000477757 A0A0G2JMP0 313 aa17.38■□□□□ 0.37
PDLIM1-202ENST00000477757 A0A0X1KG70 313 aa17.38■□□□□ 0.37
PDLIM1-202ENST00000477757 TMEM229AB2RXF0 380 aa17.38■□□□□ 0.37
PDLIM1-202ENST00000477757 RIPK2O43353 540 aa17.38■□□□□ 0.37
PDLIM1-202ENST00000477757 PPIHO43447 177 aaKnown RBP17.38■□□□□ 0.37
PDLIM1-202ENST00000477757 RP2O75695 350 aa17.38■□□□□ 0.37
PDLIM1-202ENST00000477757 GSNP06396 782 aa17.38■□□□□ 0.37
PDLIM1-202ENST00000477757 ANPEPP15144 967 aa17.38■□□□□ 0.37
PDLIM1-202ENST00000477757 HPCAP84074 193 aa17.38■□□□□ 0.37
PDLIM1-202ENST00000477757 C6orf136Q5SQH8 315 aa17.38■□□□□ 0.37
PDLIM1-202ENST00000477757 IL23RQ5VWK5 629 aa17.38■□□□□ 0.37
PDLIM1-202ENST00000477757 SYT10Q6XYQ8 523 aa17.38■□□□□ 0.37
PDLIM1-202ENST00000477757 TRMT10CQ7L0Y3 403 aaKnown RBP17.38■□□□□ 0.37
PDLIM1-202ENST00000477757 MDP1Q86V88 176 aa17.38■□□□□ 0.37
PDLIM1-202ENST00000477757 C10orf107Q8IVU9 208 aa17.38■□□□□ 0.37
PDLIM1-202ENST00000477757 OR4M2Q8NGB6 313 aa17.38■□□□□ 0.37
PDLIM1-202ENST00000477757 J3QLI3 93 aa17.37■□□□□ 0.37
PDLIM1-202ENST00000477757 FRS3O43559 492 aa17.37■□□□□ 0.37
PDLIM1-202ENST00000477757 SCN2BO60939 215 aa17.37■□□□□ 0.37
PDLIM1-202ENST00000477757 CHRNGP07510 517 aa17.37■□□□□ 0.37
PDLIM1-202ENST00000477757 ARAFP10398 606 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms