RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 LSM11P83369 360 aaKnown RBP eCLIP11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 KLF9Q13886 244 aaPredicted RBP11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 SLBPQ14493 270 aaKnown RBP eCLIP11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 SLC10A1Q14973 349 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 HMGN3Q15651 99 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 ISXQ2M1V0 245 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 MESTQ5EB52 335 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 LRIF1Q5T3J3 769 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 DMRTA1Q5VZB9 504 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 HBMQ6B0K9 141 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 LANCL3Q6ZV70 420 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 THOC6Q86W42 341 aaKnown RBP11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 BMPERQ8N8U9 685 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 SDR9C7Q8NEX9 313 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 OR10Q1Q8NGQ4 319 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 OR2A12Q8NGT7 310 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 MRGPRDQ8TDS7 321 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 EEF1AKMT1Q8WVE0 214 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 WNT2BQ93097 391 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 FBXO7Q9Y3I1 522 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 NUP210Q8TEM1 1887 aaPredicted RBP11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 NPEPPSL1A6NEC2 478 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 GRXCR1A8MXD5 290 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 CDRT15L2A8MXV6 281 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 H7C417 338 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 CLIC1O00299 241 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 GSTZ1O43708 216 aaPredicted RBP11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 UBL3O95164 117 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 HLA-DPB1P04440 258 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 DGKAP23743 735 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 NSG1P42857 185 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 MTNR1BP49286 362 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 ST8SIA6P61647 398 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 SHC2P98077 582 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 FABP5Q01469 135 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 PTGES3Q15185 160 aaKnown RBP11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 IDNKQ5T6J7 187 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 NKAIN2Q5VXU1 208 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 DCXRQ7Z4W1 244 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 SERPINA11Q86U17 422 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 NXPE1Q8N323 547 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 SLC5A8Q8N695 610 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 PNLDC1Q8NA58 520 aaKnown RBP11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 NEIL3Q8TAT5 605 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 HSH2DQ96JZ2 352 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 AMDHD1Q96NU7 426 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 EGFL8Q99944 293 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 ARHGAP9Q9BRR9 750 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 FUZQ9BT04 418 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 FAIM2Q9BWQ8 316 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 SNHG12Q9BXW3 62 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 PARD6GQ9BYG4 376 aaPredicted RBP11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 CIPCQ9C0C6 399 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 SMOC1Q9H4F8 434 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 GALPQ9UBC7 116 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 NDOR1Q9UHB4 597 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 STARD10Q9Y365 291 aa11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 PRRC2BQ5JSZ5 2229 aaKnown RBP11.68□□□□□ -0.54
RTFDC1-207ENST00000477573 SCN8AQ9UQD0 1980 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 TMEM129A0AVI4 362 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 OR6C76A6NM76 312 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 F5H5P2 479 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 TNFRSF11BO00300 401 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 KLK8O60259 260 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 ENTPD6O75354 484 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 MLYCDO95822 493 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 RPLP1P05386 114 aaKnown RBP11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 EPXP11678 715 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 BCKDHAP12694 445 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 DRD5P21918 477 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 MPZP25189 248 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 SLC14A1Q13336 389 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 KIAA0141Q14154 515 aaPredicted RBP11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 NDUFA9Q16795 377 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 OR10K2Q6IF99 312 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 WDR53Q7Z5U6 358 aaPredicted RBP11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 PPP1R3BQ86XI6 285 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 PTOV1Q86YD1 416 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 SPNS2Q8IVW8 549 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 KCNRGQ8N5I3 272 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 Q8NFD4 153 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 C16orf78Q8WTQ4 265 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 TNFRSF14Q92956 283 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 MR1Q95460 341 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 WFIKKN1Q96NZ8 548 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 ABHD1Q96SE0 405 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 C1QTNF3Q9BXJ4 246 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 FAM120CQ9NX05 1096 aaKnown RBP11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 ZSCAN32Q9NX65 697 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 ZDHHC3Q9NYG2 299 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 NUDT4Q9NZJ9 180 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 MTCH2Q9Y6C9 303 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 CHD7Q9P2D1 2997 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 SYNDIG1LA6NDD5 238 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 LRRN3E7EW58 273 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 OGG1O15527 345 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 GPR39O43194 453 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 BCL2L11O43521 198 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 OR2F2O95006 317 aa11.67□□□□□ -0.54
RTFDC1-207ENST00000477573 RPP14O95059 124 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms