RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 RTL6Q6ICC9 239 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 TBPL2Q6SJ96 375 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 MEX3DQ86XN8 651 aaKnown RBP13.7□□□□□ -0.22
SEC13-215ENST00000477547 OR6S1Q8NH40 331 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 PRR7Q8TB68 274 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 RNF128Q8TEB7 428 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 SGTBQ96EQ0 304 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 UCN2Q96RP3 112 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 ASPNQ9BXN1 380 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 FKRPQ9H9S5 495 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 TMEM5Q9Y2B1 443 aa13.7□□□□□ -0.22
SEC13-215ENST00000477547 PCNX1Q96RV3 2341 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 M0R082 166 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 CLOCKO15516 846 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 OR10H3O60404 316 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 EIF1BO60739 113 aaKnown RBP13.69□□□□□ -0.22
SEC13-215ENST00000477547 FZD7O75084 574 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 OR7A10O76100 309 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 AQP8O94778 261 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 CCNB2O95067 398 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 AKR7A3O95154 331 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 IGF2P01344 180 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 GRPRP30550 384 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 IST1P53990 364 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 CTBP2P56545 445 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 NUP107P57740 925 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 GK3PQ14409 553 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 MFSD13AQ14CX5 517 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 EIF2S3LQ2VIR3 472 aaKnown RBP13.69□□□□□ -0.22
SEC13-215ENST00000477547 OTUD3Q5T2D3 398 aaPredicted RBP13.69□□□□□ -0.22
SEC13-215ENST00000477547 PAQR6Q6TCH4 344 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 FCRLAQ7L513 359 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 MAMDC2Q7Z304 686 aaPredicted RBP13.69□□□□□ -0.22
SEC13-215ENST00000477547 SLC46A3Q7Z3Q1 461 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 NANOGNBQ7Z5D8 188 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 RNF113BQ8IZP6 322 aaKnown RBP13.69□□□□□ -0.22
SEC13-215ENST00000477547 C9orf106Q8NAJ2 232 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 OR9Q2Q8NGE9 314 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 ZNF417Q8TAU3 575 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 LRTOMTQ8WZ04 291 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 ROBO4Q8WZ75 1007 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 BPIFA2Q96DR5 249 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 FAM46AQ96IP4 442 aaKnown RBP13.69□□□□□ -0.22
SEC13-215ENST00000477547 ZNF587Q96SQ5 575 aaPredicted RBP13.69□□□□□ -0.22
SEC13-215ENST00000477547 NAA11Q9BSU3 229 aaPredicted RBP13.69□□□□□ -0.22
SEC13-215ENST00000477547 CALHM2Q9HA72 323 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 S100A14Q9HCY8 104 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 CHST11Q9NPF2 352 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 SEC14L4Q9UDX3 406 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 CORINQ9Y5Q5 1042 aa13.69□□□□□ -0.22
SEC13-215ENST00000477547 MBD3L4A6NDZ8 208 aaPredicted RBP13.68□□□□□ -0.22
SEC13-215ENST00000477547 MBD3L3A6NE82 208 aaPredicted RBP13.68□□□□□ -0.22
SEC13-215ENST00000477547 MBD3L5A6NJ08 208 aaPredicted RBP13.68□□□□□ -0.22
SEC13-215ENST00000477547 AQP7P3A6NL99 342 aa13.68□□□□□ -0.22
SEC13-215ENST00000477547 ZNF814B7Z6K7 855 aa13.68□□□□□ -0.22
SEC13-215ENST00000477547 E9PLN8 166 aa13.68□□□□□ -0.22
SEC13-215ENST00000477547 CCL21O00585 134 aa13.68□□□□□ -0.22
SEC13-215ENST00000477547 TGM6O95932 706 aa13.68□□□□□ -0.22
SEC13-215ENST00000477547 SAGP10523 405 aaPredicted RBP13.68□□□□□ -0.22
SEC13-215ENST00000477547 PRKCDQ05655 676 aa13.68□□□□□ -0.22
SEC13-215ENST00000477547 LTBQ06643 244 aa13.68□□□□□ -0.22
SEC13-215ENST00000477547 NCCRP1Q6ZVX7 275 aaPredicted RBP13.68□□□□□ -0.22
SEC13-215ENST00000477547 FJX1Q86VR8 437 aa13.68□□□□□ -0.22
SEC13-215ENST00000477547 CDK20Q8IZL9 346 aa13.68□□□□□ -0.22
SEC13-215ENST00000477547 MARVELD2Q8N4S9 558 aa13.68□□□□□ -0.22
SEC13-215ENST00000477547 TMEM99Q8N816 258 aa13.68□□□□□ -0.22
SEC13-215ENST00000477547 MBD3L2Q8NHZ7 208 aaPredicted RBP13.68□□□□□ -0.22
SEC13-215ENST00000477547 ABHD3Q8WU67 409 aa13.68□□□□□ -0.22
SEC13-215ENST00000477547 WNT2BQ93097 391 aa13.68□□□□□ -0.22
SEC13-215ENST00000477547 TM9SF2Q99805 663 aa13.68□□□□□ -0.22
SEC13-215ENST00000477547 VKORC1Q9BQB6 163 aa13.68□□□□□ -0.22
SEC13-215ENST00000477547 TTYH2Q9BSA4 534 aa13.68□□□□□ -0.22
SEC13-215ENST00000477547 NANSQ9NR45 359 aa13.68□□□□□ -0.22
SEC13-215ENST00000477547 ZNF229Q9UJW7 825 aa13.68□□□□□ -0.22
SEC13-215ENST00000477547 MEMO1Q9Y316 297 aa13.68□□□□□ -0.22
SEC13-215ENST00000477547 FBN2P35556 2912 aa13.68□□□□□ -0.22
SEC13-215ENST00000477547 HTR3EA5X5Y0 456 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 EFCAB9A8MZ26 197 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 H0YHG0 523 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 RAMP1O60894 148 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 GLI4P10075 376 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 FUT1P19526 365 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 MAKP20794 623 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 DNAJA1P31689 397 aaKnown RBP13.67□□□□□ -0.22
SEC13-215ENST00000477547 IFNGR2P38484 337 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 AGFG1P52594 562 aaKnown RBP13.67□□□□□ -0.22
SEC13-215ENST00000477547 HMGA2P52926 109 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 PER3P56645 1201 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 IL1RL1Q01638 556 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 HMBOX1Q6NT76 420 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 SEM1Q6ZVN7 128 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 AMIGO2Q86SJ2 522 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 MCEMP1Q8IX19 187 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 GCNT2Q8N0V5 402 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 LINC00471Q8N535 108 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 LRRC17Q8N6Y2 441 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 SCAIQ8N9R8 606 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 ADPRHL1Q8NDY3 354 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 OR10G2Q8NGC3 310 aa13.67□□□□□ -0.22
SEC13-215ENST00000477547 OR13C2Q8NGS9 318 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms