RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 SLU7O95391 586 aaKnown RBP6.38□□□□□ -1.39
BRCA1-214ENST00000477152 UQCRC2P22695 453 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 IGHV1-2P23083 117 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 ALDH3A1P30838 453 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 APOBEC3AP31941 199 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-214ENST00000477152 CLNS1AP54105 237 aaKnown RBP6.38□□□□□ -1.39
BRCA1-214ENST00000477152 CLDN8P56748 225 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 C21orf58P58505 322 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 PRPS1P60891 318 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 EMX2Q04743 252 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 PCLAFQ15004 111 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 ZSWIM7Q19AV6 140 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 PGGHGQ32M88 737 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 C6orf136Q5SQH8 315 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 ZNF440Q8IYI8 595 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 C4orf33Q8N1A6 199 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 ZNF433Q8N7K0 673 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-214ENST00000477152 OR4A15Q8NGL6 344 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 OTUB1Q96FW1 271 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-214ENST00000477152 TNFRSF13CQ96RJ3 184 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 INPP5KQ9BT40 448 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 CACNG6Q9BXT2 260 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 ROPN1BQ9BZX4 212 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-214ENST00000477152 DPY30Q9C005 99 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 TUBB1Q9H4B7 451 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 ARMC7Q9H6L4 198 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 ROPN1Q9HAT0 212 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-214ENST00000477152 EXOSC3Q9NQT5 275 aaKnown RBP6.38□□□□□ -1.39
BRCA1-214ENST00000477152 B3GALT5Q9Y2C3 310 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 RTTNQ86VV8 2226 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 NPIPA5A0A0B4J1W7 369 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 SHISA9B4DS77 424 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 NPIPA7E9PJI5 369 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 NPIPB9F8W1W9 429 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 H7C417 338 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 M0R1B8 84 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 ZNF208O43345 1280 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 RAD51DO75771 328 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 MYZAPP0CAP1 466 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 UBTFL6P0CB48 400 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-214ENST00000477152 NPIPA8P0DM63 369 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 EFNA1P20827 205 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-214ENST00000477152 SHC1P29353 583 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 CHI3L1P36222 383 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-214ENST00000477152 PDLIM4P50479 330 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 ZNF83P51522 516 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 EFNA4P52798 201 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 SLC16A1P53985 500 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 CASP9P55211 416 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 OR2B6P58173 313 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 VLDLRP98155 873 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 GPAT3Q53EU6 434 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 MBNL2Q5VZF2 373 aaKnown RBP6.38□□□□□ -1.39
BRCA1-214ENST00000477152 LRRC34Q8IZ02 419 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 OR52N5Q8NH56 324 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 MIPOL1Q8TD10 442 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 XAGE5Q8WWM1 108 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 RAX2Q96IS3 184 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 NPAS1Q99742 590 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 C1orf50Q9BV19 199 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 ANKZF1Q9H8Y5 726 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 ASIC5Q9NY37 505 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 TMEM181Q9P2C4 612 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 KCNS2Q9ULS6 477 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 PTGDR2Q9Y5Y4 395 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 CR1P17927 2039 aa6.38□□□□□ -1.39
BRCA1-214ENST00000477152 FN1P02751 2386 aaKnown RBP6.38□□□□□ -1.39
BRCA1-214ENST00000477152 HEATR1Q9H583 2144 aaKnown RBP6.38□□□□□ -1.39
BRCA1-214ENST00000477152 USF3Q68DE3 2245 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 A0A0A6YYJ9 748 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 PRSS51A0A1B0GVH4 220 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 TMEM247A6NEH6 219 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 EFNA2O43921 213 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 USF1P22415 310 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-214ENST00000477152 POLR2HP52434 150 aaKnown RBP6.37□□□□□ -1.39
BRCA1-214ENST00000477152 COPZ1P61923 177 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 SNRPD2P62316 118 aaKnown RBP6.37□□□□□ -1.39
BRCA1-214ENST00000477152 HBA1P69905 142 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 SKP2Q13309 424 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 PTGR1Q14914 329 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 TOMM34Q15785 309 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-214ENST00000477152 GSTA3Q16772 222 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 TMEM249Q2WGJ8 235 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 UGT3A2Q3SY77 523 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 XKR7Q5GH72 579 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.37□□□□□ -1.39
BRCA1-214ENST00000477152 C6orf52Q5T4I8 152 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 LIPNQ5VXI9 398 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 FAM219BQ5XKK7 198 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 ABLIM2Q6H8Q1 611 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 CASP12Q6UXS9 341 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 DNM1P46Q6ZS02 220 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 POMGNT2Q8NAT1 580 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 MAPK1IP1LQ8NDC0 245 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 OR10H5Q8NGA6 315 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 OR8J2Q8NGG1 315 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 OR5AN1Q8NGI8 311 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 OR5AK3PQ8NH89 298 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 AGR3Q8TD06 166 aa6.37□□□□□ -1.39
BRCA1-214ENST00000477152 MUS81Q96NY9 551 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms