RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 IL12BP29460 328 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 OR3A3P47888 321 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 PSMD4P55036 377 aaKnown RBP4.6□□□□□ -1.67
CCDC39-204ENST00000476379 FOXK2Q01167 660 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 PRKCDQ05655 676 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 ARFRP1Q13795 201 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 CDNFQ49AH0 187 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 RAB12Q6IQ22 244 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 FAM198BQ6UWH4 519 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 KIAA0907Q7Z7F0 614 aaPredicted RBP4.6□□□□□ -1.67
CCDC39-204ENST00000476379 PAQR7Q86WK9 346 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 LIX1LQ8IVB5 337 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 CPXM2Q8N436 756 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 IL17RCQ8NAC3 791 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 OR2T4Q8NH00 348 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 OR52I2Q8NH67 350 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 OR5K2Q8NHB8 316 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 C2CD4CQ8TF44 421 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 OR1E3Q8WZA6 343 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 SLC25A46Q96AG3 418 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF514Q96K75 400 aaPredicted RBP4.6□□□□□ -1.67
CCDC39-204ENST00000476379 NXF5Q9H1B4 397 aaKnown RBP4.6□□□□□ -1.67
CCDC39-204ENST00000476379 S1PR5Q9H228 398 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 BRF2Q9HAW0 419 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 TREM1Q9NP99 234 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 TAS2R3Q9NYW6 316 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF443Q9Y2A4 671 aaPredicted RBP4.6□□□□□ -1.67
CCDC39-204ENST00000476379 PRR14LQ5THK1 2151 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 MYO16Q9Y6X6 1858 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 ABCA4P78363 2273 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 FREM3P0C091 2139 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 TRBV5-4A0A0C4DH59 114 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 A0A1B0GWA3 101 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 A0A1W2PPL8 197 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 OR2AT4A6NND4 320 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 ADAM10O14672 748 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 P2RX6O15547 441 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 RCBTB2O95199 551 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 LIMS3P0CW19 117 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 LIMS4P0CW20 117 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF10P21506 573 aaPredicted RBP4.6□□□□□ -1.67
CCDC39-204ENST00000476379 SLC2A5P22732 501 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 RAD52P43351 418 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 GZMMP51124 257 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 GRK1Q15835 563 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 SMUG1Q53HV7 270 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 HEPHL1Q6MZM0 1159 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 Q6ZSR6 202 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 GPR155Q7Z3F1 870 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 MDGA2Q7Z553 956 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 MINDY2Q8NBR6 621 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 RCBTB1Q8NDN9 531 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 ABHD4Q8TB40 342 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 NEK7Q8TDX7 302 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 TMEM106AQ96A25 262 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 WDR89Q96FK6 387 aaPredicted RBP4.6□□□□□ -1.67
CCDC39-204ENST00000476379 FAM71F1Q96KD3 344 aaPredicted RBP4.6□□□□□ -1.67
CCDC39-204ENST00000476379 SLC6A18Q96N87 628 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 ACTRT3Q9BYD9 372 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 NARFLQ9H6Q4 476 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 WDR76Q9H967 626 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 LIN7BQ9HAP6 207 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 RBFOX1Q9NWB1 397 aaKnown RBP4.6□□□□□ -1.67
CCDC39-204ENST00000476379 LYARQ9NX58 379 aaKnown RBP4.6□□□□□ -1.67
CCDC39-204ENST00000476379 MAFFQ9ULX9 164 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 SLC22A13Q9Y226 551 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 B3GNT3Q9Y2A9 372 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 EXOSC1Q9Y3B2 195 aaKnown RBP4.6□□□□□ -1.67
CCDC39-204ENST00000476379 RWDD3Q9Y3V2 267 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 HSPE1-MOB4S4R3N1 261 aa4.6□□□□□ -1.67
CCDC39-204ENST00000476379 URADA6NGE7 173 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 DUXAA6NLW8 204 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF879B4DU55 563 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 PLA2G10O15496 165 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 COQ9O75208 318 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 TCRBP04435 133 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 GIMD1P0DJR0 217 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 TMIGD3P0DMS9 266 aaPredicted RBP4.59□□□□□ -1.67
CCDC39-204ENST00000476379 EMDP50402 254 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 RRAS2P62070 204 aaPredicted RBP4.59□□□□□ -1.67
CCDC39-204ENST00000476379 HHEXQ03014 270 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 BAMBIQ13145 260 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 PLK5Q496M5 336 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 SLX4IPQ5VYV7 408 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 ABHD17CQ6PCB6 329 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 SRFBP1Q8NEF9 429 aaKnown RBP4.59□□□□□ -1.67
CCDC39-204ENST00000476379 OR2A1Q8NGT9 310 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 ZPLD1Q8TCW7 415 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.59□□□□□ -1.67
CCDC39-204ENST00000476379 ACOT11Q8WXI4 607 aaPredicted RBP4.59□□□□□ -1.67
CCDC39-204ENST00000476379 MS4A6EQ96DS6 147 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 NEURL3Q96EH8 262 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 FAM83CQ9BQN1 747 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 CCDC32Q9BV29 185 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF350Q9GZX5 532 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF701Q9NV72 531 aaPredicted RBP4.59□□□□□ -1.67
CCDC39-204ENST00000476379 FTSJ1Q9UET6 329 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 GBF1Q92538 1859 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 ADGRG4Q8IZF6 3080 aa4.59□□□□□ -1.67
CCDC39-204ENST00000476379 PTPRQQ9UMZ3 2332 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms