RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 ZSWIM7Q19AV6 140 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 PRAMEF8Q5VWM4 474 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 PRAMEF7Q5VXH5 474 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 OGFOD2Q6N063 350 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 NIPAL3Q6P499 406 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 ANKRD16Q6P6B7 361 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 VHLLQ6RSH7 139 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 CREB3L2Q70SY1 520 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 VRK2Q86Y07 508 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 FAM169BQ8N8A8 192 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 PNPT1Q8TCS8 783 aaKnown RBP9.42□□□□□ -0.9
CDRT1-205ENST00000475944 BCL2L2Q92843 193 aaPredicted RBP9.42□□□□□ -0.9
CDRT1-205ENST00000475944 OR52E6Q96RD3 313 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 LINC00470Q9BZP3 86 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 C20orf27Q9GZN8 174 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 PLK3Q9H4B4 646 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 MEAF6Q9HAF1 191 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 CACYBPQ9HB71 228 aaKnown RBP9.42□□□□□ -0.9
CDRT1-205ENST00000475944 RLIMQ9NVW2 624 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 CALML5Q9NZT1 146 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 P2RX2Q9UBL9 471 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 HAO1Q9UJM8 370 aa9.42□□□□□ -0.9
CDRT1-205ENST00000475944 ARFGEF3Q5TH69 2177 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 DSPPQ9NZW4 1301 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 TM9SF1O15321 606 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 AHSA1O95433 338 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 IGKV3-15P01624 115 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 IGLV1-44P01699 117 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 TFPTP0C1Z6 253 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 GKN3PP0CG01 181 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 NCF2P19878 526 aaPredicted RBP9.41□□□□□ -0.9
CDRT1-205ENST00000475944 GIFP27352 417 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 GTF2E2P29084 291 aaKnown RBP9.41□□□□□ -0.9
CDRT1-205ENST00000475944 ACAA2P42765 397 aaKnown RBP9.41□□□□□ -0.9
CDRT1-205ENST00000475944 CDKN2CP42773 168 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 P2RY4P51582 365 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 CHN2P52757 468 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 CRISP3P54108 245 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 NME5P56597 212 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 UFM1P61960 85 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 SRSF2Q01130 221 aaKnown RBP9.41□□□□□ -0.9
CDRT1-205ENST00000475944 BNIP2Q12982 314 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 LARS2Q15031 903 aaKnown RBP9.41□□□□□ -0.9
CDRT1-205ENST00000475944 CR1LQ2VPA4 569 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 COX20Q5RI15 118 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 RNF220Q5VTB9 566 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 C1orf140Q5VVS0 124 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 ZNF836Q6ZNA1 936 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 LSRQ86X29 649 aaPredicted RBP9.41□□□□□ -0.9
CDRT1-205ENST00000475944 RFLNBQ8N5W9 214 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 ANKK1Q8NFD2 765 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 NUP37Q8NFH4 326 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 OR52P1PQ8NH57 321 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 STK35Q8TDR2 534 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 NEU4Q8WWR8 484 aaPredicted RBP9.41□□□□□ -0.9
CDRT1-205ENST00000475944 TEX37Q96LM6 180 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 SORT1Q99523 831 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 ZBTB18Q99592 522 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 TMEM109Q9BVC6 243 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 ARMC7Q9H6L4 198 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 ZNF442Q9H7R0 627 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 AIG1Q9NVV5 245 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 ZNF232Q9UNY5 417 aa9.41□□□□□ -0.9
CDRT1-205ENST00000475944 ZNF443Q9Y2A4 671 aaPredicted RBP9.41□□□□□ -0.9
CDRT1-205ENST00000475944 MALRD1Q5VYJ5 2156 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 A0A096LPE4 126 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 A0A1W2PPZ6 126 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 RPL36A-HNRNPH2H7BZ11 118 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 hCG_2039718K7EN88 272 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 NR5A2O00482 541 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 RFXANKO14593 260 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 TCF21O43680 179 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 NPIPB7O75200 414 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 UPK3AO75631 287 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 STAMBPO95630 424 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 BCHEP06276 602 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 GSNP06396 782 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 TACSTD2P09758 323 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 ALDOCP09972 364 aaKnown RBP9.4□□□□□ -0.9
CDRT1-205ENST00000475944 DAOP14920 347 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 ZNF43P17038 809 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 NPR2P20594 1047 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 CALCRP30988 508 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 VSNL1P62760 191 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 TUBA1BP68363 451 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 TUBA4AP68366 448 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 ROR2Q01974 943 aaKnown RBP9.4□□□□□ -0.9
CDRT1-205ENST00000475944 LGALS3BPQ08380 585 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 STX3Q13277 289 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 KRT71Q3SY84 523 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 UGT2A3Q6UWM9 527 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 TUBA1AQ71U36 451 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 LINGO2Q7L985 606 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 EPHX4Q8IUS5 362 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 GLB1L3Q8NCI6 653 aaPredicted RBP9.4□□□□□ -0.9
CDRT1-205ENST00000475944 MFSD8Q8NHS3 518 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 ANKRD27Q96NW4 1050 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 NELFAQ9H3P2 528 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 SSU72Q9NP77 194 aaKnown RBP9.4□□□□□ -0.9
CDRT1-205ENST00000475944 DYNLRB1Q9NP97 96 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms