RNA–Protein interactions for RNA: ENST00000475651.5

RBM39-229, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-229	ENST00000475651	GABRA3	P34903	492 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	TRIM23	P36406	574 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	RPL4	P36578	427 aa	Known RBP	3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	ACTR1B	P42025	376 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	OMP	P47874	163 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	RFX3	P48380	749 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	EVX1	P49640	407 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	METAP1	P53582	386 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	GNG2	P59768	71 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	ACTR1A	P61163	376 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	BTG1	P62324	171 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	POU6F2	P78424	691 aa	Predicted RBP	3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	FABP5	Q01469	135 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	SLC3A1	Q07837	685 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	CD300C	Q08708	224 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	ACSM1	Q08AH1	577 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	STX4	Q12846	297 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	ILF3	Q12906	894 aa	Known RBP eCLIP	3.84	□□□□□ -1.79	5e-12	■■□□□ 11.4
RBM39-229	ENST00000475651	GALE	Q14376	348 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	PON3	Q15166	354 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	SF3B4	Q15427	424 aa	Known RBP eCLIP	3.84	□□□□□ -1.79	4e-17	■■■■■ 47.6
RBM39-229	ENST00000475651	OR1Q1	Q15612	314 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	BCL2A1	Q16548	175 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	BAK1	Q16611	211 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	TATDN3	Q17R31	274 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	ZNF791	Q3KP31	576 aa	Predicted RBP	3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	AMZ1	Q400G9	498 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	GLYR1	Q49A26	553 aa	Predicted RBP	3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	FLYWCH1	Q4VC44	716 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	HSD17B12	Q53GQ0	312 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	ZNF628	Q5EBL2	1059 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	MANEA	Q5SRI9	462 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	DCST2	Q5T1A1	773 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	LCE1A	Q5T7P2	110 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	PIP5KL1	Q5T9C9	394 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	SLC22A10	Q63ZE4	541 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	HBM	Q6B0K9	141 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	PYHIN1	Q6K0P9	492 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	MFSD12	Q6NUT3	480 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	PLBD1	Q6P4A8	553 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	ARHGAP11A	Q6P4F7	1023 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	ZNF613	Q6PF04	617 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	FIGLA	Q6QHK4	219 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	SMARCD3	Q6STE5	483 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	ARL9	Q6T311	187 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	PAQR6	Q6TCH4	344 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	ZNF793	Q6ZN11	406 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	ZNF620	Q6ZNG0	422 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	RTL4	Q6ZR62	310 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	ZNF767P	Q75MW2	155 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	HIST3H2A	Q7L7L0	130 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	SHF	Q7M4L6	423 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	ZNF550	Q7Z398	422 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	FAM220A	Q7Z4H9	259 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	NANOGNB	Q7Z5D8	188 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	BCDIN3D	Q7Z5W3	292 aa	Known RBP	3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	CEACAM19	Q7Z692	300 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	HMGN2P46	Q86SG4	172 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	LRRC28	Q86X40	367 aa	Predicted RBP	3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	ZNF440	Q8IYI8	595 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	TCTE3	Q8IZS6	198 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	RDH10	Q8IZV5	341 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	SLC7A5P1	Q8MH63	180 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	UBE2J2	Q8N2K1	259 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	TOMM5	Q8N4H5	51 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	C10orf53	Q8N6V4	93 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	C12orf76	Q8N812	135 aa	Predicted RBP	3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	SAMD12	Q8N8I0	201 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	ZFP41	Q8N8Y5	198 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	POGLUT1	Q8NBL1	392 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	CLRN3	Q8NCR9	226 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	MORN4	Q8NDC4	146 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	OR2A1	Q8NGT9	310 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	OR6F1	Q8NGZ6	308 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	OR5W2	Q8NH69	310 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	OR10G6	Q8NH81	332 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	LILRB4	Q8NHJ6	448 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	SPATA3	Q8NHX4	192 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	ZCCHC10	Q8TBK6	192 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	BRIX1	Q8TDN6	353 aa	Known RBP	3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	HAVCR2	Q8TDQ0	301 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	C17orf50	Q8WW18	174 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	DNAJA4	Q8WW22	397 aa	Predicted RBP	3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	APOBEC4	Q8WW27	367 aa	Known RBP	3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	ZFPM2	Q8WW38	1151 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	FGF13	Q92913	245 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	BAD	Q92934	168 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	HIST1H2AC	Q93077	130 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	CNRIP1	Q96F85	164 aa	Predicted RBP	3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	SIPA1	Q96FS4	1042 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	SLC35A4	Q96G79	324 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	ART5	Q96L15	291 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	HYLS1	Q96M11	299 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	MYADM	Q96S97	322 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	STAC	Q99469	402 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	C7orf50	Q9BRJ6	194 aa	Known RBP	3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	TTYH2	Q9BSA4	534 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	WAC	Q9BTA9	647 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	KATNB1	Q9BVA0	655 aa		3.84	□□□□□ -1.79
RBM39-229	ENST00000475651	BARHL1	Q9BZE3	327 aa		3.84	□□□□□ -1.79

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