RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 SSX8Q7RTT4 187 aa13.39□□□□□ -0.27
VARS-223ENST00000474643 ADGRG3Q86Y34 549 aa13.39□□□□□ -0.27
VARS-223ENST00000474643 PIGXQ8TBF5 258 aa13.39□□□□□ -0.27
VARS-223ENST00000474643 APH1AQ96BI3 265 aa13.39□□□□□ -0.27
VARS-223ENST00000474643 ZNF300Q96RE9 604 aaPredicted RBP13.39□□□□□ -0.27
VARS-223ENST00000474643 OR11A1Q9GZK7 315 aa13.39□□□□□ -0.27
VARS-223ENST00000474643 PRSS50Q9UI38 385 aa13.39□□□□□ -0.27
VARS-223ENST00000474643 POU2F3Q9UKI9 436 aa13.39□□□□□ -0.27
VARS-223ENST00000474643 HDGFL3Q9Y3E1 203 aa13.39□□□□□ -0.27
VARS-223ENST00000474643 DSCAMO60469 2012 aa13.39□□□□□ -0.27
VARS-223ENST00000474643 TMEM72A0PK05 275 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 ZNF724A8MTY0 619 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 GPR171O14626 319 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 GSTA4O15217 222 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 UBOX5O94941 541 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 MFN2O95140 757 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 LY6G6DO95868 133 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 CLK1P49759 484 aaKnown RBP13.38□□□□□ -0.27
VARS-223ENST00000474643 BSPH1Q075Z2 132 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 DMTNQ08495 405 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 FAPQ12884 760 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 VEZF1Q14119 521 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 GLIPR1L2Q4G1C9 344 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 ADAM5Q6NVV9 412 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 RANBP3LQ86VV4 465 aaPredicted RBP13.38□□□□□ -0.27
VARS-223ENST00000474643 PGAM4Q8N0Y7 254 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 OR2T12Q8NG77 320 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 OR52E4Q8NGH9 312 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 RASSF5Q8WWW0 418 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 SLC35B4Q969S0 331 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 EVA1AQ9H8M9 152 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 TMEM27Q9HBJ8 222 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 SPAG4Q9NPE6 437 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 PRDM4Q9UKN5 801 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 CHST2Q9Y4C5 530 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 ARID1AO14497 2285 aa13.38□□□□□ -0.27
VARS-223ENST00000474643 ELOA3DA6NLF2 546 aaPredicted RBP13.37□□□□□ -0.27
VARS-223ENST00000474643 FAM220BPB1ANY3 271 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 ZNF208O43345 1280 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 MRPL33O75394 65 aaKnown RBP13.37□□□□□ -0.27
VARS-223ENST00000474643 IFNA14P01570 189 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 IGHV3-9P01782 118 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 PCSK6P29122 969 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 MAP2K6P52564 334 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 SLC7A2P52569 658 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 PCBP3P57721 371 aaKnown RBP13.37□□□□□ -0.27
VARS-223ENST00000474643 MXRA7P84157 204 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 ELOA3BQ3SY89 546 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 NCMAPQ5T1S8 102 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 KLHL17Q6TDP4 642 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 CASP12Q6UXS9 341 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 CALHM3Q86XJ0 350 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 PIAS4Q8N2W9 510 aaPredicted RBP13.37□□□□□ -0.27
VARS-223ENST00000474643 CIARTQ8N365 385 aaPredicted RBP13.37□□□□□ -0.27
VARS-223ENST00000474643 ELOA3Q8NG57 546 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 VANGL1Q8TAA9 524 aaPredicted RBP13.37□□□□□ -0.27
VARS-223ENST00000474643 SMAP2Q8WU79 429 aaPredicted RBP13.37□□□□□ -0.27
VARS-223ENST00000474643 PROX1Q92786 737 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 ARL5BQ96KC2 179 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 HS6ST2Q96MM7 605 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 ZNF583Q96ND8 569 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 TMEM204Q9BSN7 226 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 NAA11Q9BSU3 229 aaPredicted RBP13.37□□□□□ -0.27
VARS-223ENST00000474643 TAPBPLQ9BX59 468 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 TRIM2Q9C040 744 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 ADAM19Q9H013 955 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 ASB6Q9NWX5 421 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 TMEM181Q9P2C4 612 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 ABCD2Q9UBJ2 740 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 UPB1Q9UBR1 384 aa13.37□□□□□ -0.27
VARS-223ENST00000474643 TESQ9UGI8 421 aaKnown RBP13.37□□□□□ -0.27
VARS-223ENST00000474643 ELOVL7A1L3X0 281 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 B2RBV5 119 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 ZNF814B7Z6K7 855 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 M0R3H8 397 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 DNPH1O43598 174 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 EIF1BO60739 113 aaKnown RBP13.36□□□□□ -0.27
VARS-223ENST00000474643 RAD51DO75771 328 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 PMS2P2O95744 297 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 IDUAP35475 653 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 GZMMP51124 257 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 CDH11P55287 796 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 SLC35A1P78382 337 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 BNIP2Q12982 314 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 ZNF672Q499Z4 452 aaPredicted RBP13.36□□□□□ -0.27
VARS-223ENST00000474643 DNAL1Q4LDG9 190 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 LRRC23Q53EV4 343 aaPredicted RBP13.36□□□□□ -0.27
VARS-223ENST00000474643 TIMM23BQ5SRD1 257 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 ABLIM2Q6H8Q1 611 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 CCDC121Q6ZUS5 278 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 P2RY8Q86VZ1 359 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 MICU2Q8IYU8 434 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 DEPDC4Q8N2C3 294 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 KBTBD8Q8NFY9 601 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 C3orf49Q96BT1 292 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 CMTM6Q9NX76 183 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 PRPF19Q9UMS4 504 aaKnown RBP13.36□□□□□ -0.27
VARS-223ENST00000474643 USP22Q9UPT9 525 aa13.36□□□□□ -0.27
VARS-223ENST00000474643 A8MVM7 634 aa13.35□□□□□ -0.27
VARS-223ENST00000474643 TP53P04637 393 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms