RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 CPN1P15169 458 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 PMCHP20382 165 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 XKP51811 444 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 NAPAP54920 295 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 SNRPNP63162 240 aaKnown RBP5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 DYNLL1P63167 89 aaKnown RBP5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 CDK10Q15131 360 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 ACSM3Q53FZ2 586 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 FGD3Q5JSP0 725 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 RBM48Q5RL73 367 aaKnown RBP5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 FAM198BQ6UWH4 519 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 GCNT7Q6ZNI0 430 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 ZNF572Q7Z3I7 529 aaPredicted RBP5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 GRINAQ7Z429 371 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 ADGRE4PQ86SQ3 457 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 RNF130Q86XS8 419 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 WFDC3Q8IUB2 231 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 ZBTB8OSQ8IWT0 167 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 SMYD4Q8IYR2 804 aaPredicted RBP5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 CPXM2Q8N436 756 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 TMEM251Q8N6I4 163 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 CDRT4Q8N9R6 151 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 CHDHQ8NE62 594 aaPredicted RBP5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 OR11H1Q8NG94 326 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 OR1M1Q8NGA1 313 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 OR11H2Q8NH07 326 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 CD200R1Q8TD46 325 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 SH3RF2Q8TEC5 729 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 ADAMTS14Q8WXS8 1223 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 DNAJC9Q8WXX5 260 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 TMEM234Q8WY98 164 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 MARK4Q96L34 752 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 VAT1Q99536 393 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 TMEM39BQ9GZU3 492 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 ING2Q9H160 280 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 ESRP2Q9H6T0 727 aaKnown RBP5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 TPT1P8Q9HAU6 139 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 C6orf50Q9HD87 102 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 DDIT4Q9NX09 232 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 FLRT1Q9NZU1 646 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 MAP3K2Q9Y2U5 619 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 SIT1Q9Y3P8 196 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 WNT6Q9Y6F9 365 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 SIP14410 1827 aa5.55□□□□□ -1.52
SMARCE1-208ENST00000474246 CDK5RAP2Q96SN8 1893 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 LRRK2Q5S007 2527 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 PRSS37A4D1T9 235 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 OR1F1O43749 312 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 SC5DO75845 299 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 OR2J2O76002 312 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 SUPT7LO94864 414 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 RCBTB2O95199 551 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 TTC4O95801 387 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 PAK4O96013 591 aaPredicted RBP5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 APRTP07741 180 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 SPP1P10451 314 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 ZNF25P17030 456 aaPredicted RBP5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 GJC1P36383 396 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 RPS19P39019 145 aaKnown RBP5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 RBM34P42696 430 aaKnown RBP5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 CD81P60033 236 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 RANP62826 216 aaKnown RBP5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 FOXE3Q13461 319 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 TMEM176BQ3YBM2 270 aaPredicted RBP5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 AGKQ53H12 422 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 DCAF12L2Q5VW00 463 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 ZNF770Q6IQ21 691 aaPredicted RBP5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 TMEM65Q6PI78 240 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 TMPRSS11AQ6ZMR5 421 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 COMMD2Q86X83 199 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 WDFY1Q8IWB7 410 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 LAX1Q8IWV1 398 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 OR2T11Q8NH01 316 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 KCNA7Q96RP8 456 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 TTYH2Q9BSA4 534 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 MRPS26Q9BYN8 205 aaKnown RBP5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 ARV1Q9H2C2 271 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 PIGMQ9H3S5 423 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 LDAHQ9H6V9 325 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 EGLN3Q9H6Z9 239 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 SIDT1Q9NXL6 827 aaKnown RBP5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 MAT2BQ9NZL9 334 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 SAE1Q9UBE0 346 aaPredicted RBP5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 SEC14L4Q9UDX3 406 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 FBXL7Q9UJT9 491 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 TRIOO75962 3097 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 ANKRD36CQ5JPF3 1778 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 ASXL3Q9C0F0 2248 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 H0Y8X5 98 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 IFNL4K9M1U5 179 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 KCNK1O00180 336 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 OR2J3O76001 311 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 SCGNO76038 276 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 TNFAIP8O95379 198 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 TDP2O95551 362 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 CPNE6O95741 557 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 ANKRD34CP0C6C1 535 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 HAPLN1P10915 354 aaPredicted RBP5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 SERPINA2P20848 420 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms