RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 CDH2P19022 906 aaPredicted RBP11.65□□□□□ -0.54
COPS7B-219ENST00000474042 BNIP2Q12982 314 aa11.65□□□□□ -0.54
COPS7B-219ENST00000474042 GGTLC2Q14390 218 aa11.65□□□□□ -0.54
COPS7B-219ENST00000474042 EFNB3Q15768 340 aa11.65□□□□□ -0.54
COPS7B-219ENST00000474042 C1orf140Q5VVS0 124 aa11.65□□□□□ -0.54
COPS7B-219ENST00000474042 CREB3L2Q70SY1 520 aa11.65□□□□□ -0.54
COPS7B-219ENST00000474042 EPHX4Q8IUS5 362 aa11.65□□□□□ -0.54
COPS7B-219ENST00000474042 CADM2Q8N3J6 435 aa11.65□□□□□ -0.54
COPS7B-219ENST00000474042 ARIH2OSQ8N7S6 290 aa11.65□□□□□ -0.54
COPS7B-219ENST00000474042 GLB1L3Q8NCI6 653 aaPredicted RBP11.65□□□□□ -0.54
COPS7B-219ENST00000474042 BCL2L2Q92843 193 aaPredicted RBP11.65□□□□□ -0.54
COPS7B-219ENST00000474042 C3orf49Q96BT1 292 aa11.65□□□□□ -0.54
COPS7B-219ENST00000474042 TAPBPLQ9BX59 468 aa11.65□□□□□ -0.54
COPS7B-219ENST00000474042 LINC00470Q9BZP3 86 aa11.65□□□□□ -0.54
COPS7B-219ENST00000474042 TMEM45AQ9NWC5 275 aa11.65□□□□□ -0.54
COPS7B-219ENST00000474042 ADPRHL2Q9NX46 363 aa11.65□□□□□ -0.54
COPS7B-219ENST00000474042 CALML5Q9NZT1 146 aa11.65□□□□□ -0.54
COPS7B-219ENST00000474042 A0A096LPI6 279 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 IGHV4-61A0A0C4DH41 118 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 LOC390937A0A1W2PQ73 354 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 SLC35F4A4IF30 521 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 OR6C65A6NJZ3 312 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 B9A039 149 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 FTCDNL1E5RQL4 147 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 RFXANKO14593 260 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 TFPTP0C1Z6 253 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 CECR9P0C854 216 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 ZCCHC18P0CG32 403 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 PRG2P13727 222 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 EPHA3P29320 983 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 SERPINF1P36955 418 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 PPOXP50336 477 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 CRISP3P54108 245 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 SH3BGRP55822 239 aaPredicted RBP11.64□□□□□ -0.55
COPS7B-219ENST00000474042 DSTNP60981 165 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 NAAAQ02083 359 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 ADIPOQQ15848 244 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 ZSWIM7Q19AV6 140 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 RPS26P11Q5JNZ5 115 aaPredicted RBP11.64□□□□□ -0.55
COPS7B-219ENST00000474042 PRAMEF8Q5VWM4 474 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 PRAMEF7Q5VXH5 474 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 FAM166AQ6J272 317 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 SLC46A3Q7Z3Q1 461 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 CLIP4Q8N3C7 705 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 FAM169BQ8N8A8 192 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 ANKS4BQ8N8V4 417 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 STK35Q8TDR2 534 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 SLC38A5Q8WUX1 472 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 MSI2Q96DH6 328 aaKnown RBP11.64□□□□□ -0.55
COPS7B-219ENST00000474042 TRIM44Q96DX7 344 aaPredicted RBP11.64□□□□□ -0.55
COPS7B-219ENST00000474042 ZBTB18Q99592 522 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 PTDSS2Q9BVG9 487 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 SPATA9Q9BWV2 254 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 SEC61A2Q9H9S3 476 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 KCNS2Q9ULS6 477 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 RCE1Q9Y256 329 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 RASD1Q9Y272 281 aa11.64□□□□□ -0.55
COPS7B-219ENST00000474042 SVEP1Q4LDE5 3571 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 HDAC3O15379 428 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 SNNO75324 88 aaPredicted RBP11.63□□□□□ -0.55
COPS7B-219ENST00000474042 UPK3AO75631 287 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 KRT33AO76009 404 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 IGKV3-15P01624 115 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 CRYAAP02489 173 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 APEHP13798 732 aaKnown RBP11.63□□□□□ -0.55
COPS7B-219ENST00000474042 SRD5A1P18405 259 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 CALCRP30988 508 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 UBE2NP61088 152 aaKnown RBP11.63□□□□□ -0.55
COPS7B-219ENST00000474042 COPZ1P61923 177 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 TUBA1BP68363 451 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 TUBA4AP68366 448 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 LARS2Q15031 903 aaKnown RBP11.63□□□□□ -0.55
COPS7B-219ENST00000474042 GTDC1Q4AE62 458 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 PDCD4Q53EL6 469 aaKnown RBP11.63□□□□□ -0.55
COPS7B-219ENST00000474042 TMEM225Q6GV28 225 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 NIPAL3Q6P499 406 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 ANKRD16Q6P6B7 361 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 C6orf89Q6UWU4 347 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 MSANTD1Q6ZTZ1 278 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 TUBA1AQ71U36 451 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 SERPINA11Q86U17 422 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 MYPOPQ86VE0 399 aaPredicted RBP11.63□□□□□ -0.55
COPS7B-219ENST00000474042 ANKK1Q8NFD2 765 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 NUP37Q8NFH4 326 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 MFSD8Q8NHS3 518 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 TMEM19Q96HH6 336 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 MAELQ96JY0 434 aaKnown RBP11.63□□□□□ -0.55
COPS7B-219ENST00000474042 KCNS3Q9BQ31 491 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 PLK3Q9H4B4 646 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 WDR55Q9H6Y2 383 aaPredicted RBP11.63□□□□□ -0.55
COPS7B-219ENST00000474042 ZNF442Q9H7R0 627 aa11.63□□□□□ -0.55
COPS7B-219ENST00000474042 MOV10Q9HCE1 1003 aaKnown RBP11.63□□□□□ -0.55
COPS7B-219ENST00000474042 LOC100289279A0A1B0GTE1 492 aa11.62□□□□□ -0.55
COPS7B-219ENST00000474042 RPL36A-HNRNPH2H7BZ11 118 aa11.62□□□□□ -0.55
COPS7B-219ENST00000474042 NR5A2O00482 541 aa11.62□□□□□ -0.55
COPS7B-219ENST00000474042 ZNF432O94892 652 aa11.62□□□□□ -0.55
COPS7B-219ENST00000474042 AHSA1O95433 338 aa11.62□□□□□ -0.55
COPS7B-219ENST00000474042 IL6P05231 212 aa11.62□□□□□ -0.55
COPS7B-219ENST00000474042 OR4A8P0C604 315 aa11.62□□□□□ -0.55
COPS7B-219ENST00000474042 PNMTP11086 282 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms