RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 KLHDC3Q9BQ90 382 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 NOX4Q9NPH5 578 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 HRASLS2Q9NWW9 162 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 LRIT1Q9P2V4 623 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 ELF5Q9UKW6 265 aaPredicted RBP10.02□□□□□ -0.8
C9orf3-214ENST00000473778 YBX2Q9Y2T7 364 aaKnown RBP10.02□□□□□ -0.8
C9orf3-214ENST00000473778 CLDN16Q9Y5I7 305 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 NUBP2Q9Y5Y2 271 aa10.02□□□□□ -0.8
C9orf3-214ENST00000473778 ANKRD61A6NGH8 418 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 NPIPB9F8W1W9 429 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 GPR171O14626 319 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 TSPAN4O14817 238 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 FLRT2O43155 660 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 HOXC4P09017 264 aaPredicted RBP10.02□□□□□ -0.81
C9orf3-214ENST00000473778 OR2T7P0C7T2 308 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 SSTR2P30874 369 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 GGTLC2Q14390 218 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 TEX261Q6UWH6 196 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 SERPINA12Q8IW75 414 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 LINC00469Q8N7U9 141 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 GALNT11Q8NCW6 608 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 OR11G2Q8NGC1 345 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 OR8H1Q8NGG4 311 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 OR2T27Q8NH04 317 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 VSTM2LQ96N03 204 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 TSSK2Q96PF2 358 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 PBX4Q9BYU1 374 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 TSPAN10Q9H1Z9 355 aaPredicted RBP10.02□□□□□ -0.81
C9orf3-214ENST00000473778 C14orf105Q9NVL8 296 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 WBP1LQ9NX94 342 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 NCDNQ9UBB6 729 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 CPNE7Q9UBL6 633 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 SPATA2Q9UM82 520 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 U3KQ87 197 aa10.02□□□□□ -0.81
C9orf3-214ENST00000473778 WDFY3Q8IZQ1 3526 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 ZFPL1O95159 310 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 AK1P00568 194 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 CT45A8P0DMV1 189 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 CT45A9P0DMV2 189 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 ST6GAL1P15907 406 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 ZNF10P21506 573 aaPredicted RBP10.01□□□□□ -0.81
C9orf3-214ENST00000473778 EDNRAP25101 427 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 GDNFP39905 211 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 TNFRSF4P43489 277 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 SELENOPP49908 381 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 POU4F2Q12837 409 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 CAMK2DQ13557 499 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 LGALSLQ3ZCW2 172 aaPredicted RBP10.01□□□□□ -0.81
C9orf3-214ENST00000473778 CT45A2Q5DJT8 189 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 SHEQ5VZ18 495 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 SFRP4Q6FHJ7 346 aaPredicted RBP10.01□□□□□ -0.81
C9orf3-214ENST00000473778 TMEM92Q6UXU6 159 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 NUDT18Q6ZVK8 323 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 CDH24Q86UP0 819 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 OR6K6Q8NGW6 343 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 OR14A16Q8NHC5 309 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 SNX33Q8WV41 574 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 SMIM4Q8WVI0 70 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 RSC1A1Q92681 617 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 EMC7Q9NPA0 242 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 ZC4H2Q9NQZ6 224 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 ABRACLQ9P1F3 81 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 KLK11Q9UBX7 282 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 BAIAP2Q9UQB8 552 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 IGKV1D-42A0A075B6H8 117 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 A0A1B0GVT2 93 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 A8MUA0 341 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 I3L521 148 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 OR10H2O60403 315 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 NDUFB2O95178 105 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 MPC2O95563 127 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 IFNGP01579 166 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 SLC35E2P0CK97 266 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 ANXA3P12429 323 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 TYRP1P17643 537 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 SPI1P17947 270 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 SRMP19623 302 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 RBM34P42696 430 aaKnown RBP10.01□□□□□ -0.81
C9orf3-214ENST00000473778 CBX5P45973 191 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 PGDP52209 483 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 ERVK-25P63136 954 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 MAT1AQ00266 395 aaKnown RBP10.01□□□□□ -0.81
C9orf3-214ENST00000473778 SNTB2Q13425 540 aaKnown RBP10.01□□□□□ -0.81
C9orf3-214ENST00000473778 FGFBP1Q14512 234 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 CLVS2Q5SYC1 327 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 LINC01590Q5TEZ4 76 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 CD276Q5ZPR3 534 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 FAAP20Q6NZ36 180 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 SEZ6L2Q6UXD5 910 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 UNQ9370/PRO34162Q6UXP9 181 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 SYS1Q8N2H4 156 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 ZNF680Q8NEM1 530 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 MOSPD2Q8NHP6 518 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 SLC37A2Q8TED4 501 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 ADAMTS14Q8WXS8 1223 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 ELSPBP1Q96BH3 223 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 LMF2Q9BU23 707 aaKnown RBP10.01□□□□□ -0.81
C9orf3-214ENST00000473778 NRIP3Q9NQ35 241 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 NKIRAS2Q9NYR9 191 aa10.01□□□□□ -0.81
C9orf3-214ENST00000473778 HCN3Q9P1Z3 774 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms