RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 BMXP51813 675 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 MXD1Q05195 221 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 C1DQ13901 141 aaKnown RBP5.64□□□□□ -1.51
CLK1-210ENST00000473565 EFR3AQ14156 821 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 HES3Q5TGS1 186 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 SLC6A19Q695T7 634 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 PPP1R32Q7Z5V6 425 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 ADCK1Q86TW2 530 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 SLC15A4Q8N697 577 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 TMCO6Q96DC7 493 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 SPACA9Q96E40 222 aaPredicted RBP5.64□□□□□ -1.51
CLK1-210ENST00000473565 LRFN5Q96NI6 719 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 SMAD5Q99717 465 aaKnown RBP5.64□□□□□ -1.51
CLK1-210ENST00000473565 STRADBQ9C0K7 418 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 SLIRPQ9GZT3 109 aaKnown RBP5.64□□□□□ -1.51
CLK1-210ENST00000473565 CDCP1Q9H5V8 836 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 ADGRL4Q9HBW9 690 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 NRIP3Q9NQ35 241 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 RPRD1BQ9NQG5 326 aaKnown RBP5.64□□□□□ -1.51
CLK1-210ENST00000473565 PPP4R1LQ9P1A2 415 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 NXT1Q9UKK6 140 aaKnown RBP5.64□□□□□ -1.51
CLK1-210ENST00000473565 TCFL5Q9UL49 500 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 EXOGQ9Y2C4 368 aaKnown RBP5.64□□□□□ -1.51
CLK1-210ENST00000473565 SIRT4Q9Y6E7 314 aaPredicted RBP5.64□□□□□ -1.51
CLK1-210ENST00000473565 BOD1L1Q8NFC6 3051 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 FRYQ5TBA9 3013 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 E9PI62 339 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 J3QRE1 110 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 PSMD9O00233 223 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 EFNA2O43921 213 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 SELENOFO60613 162 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 MT-CO3P00414 261 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 TFP02787 698 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 BGLAPP02818 100 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 PRKCAP17252 672 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 CRYBB2P43320 205 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 Q0VFX4 171 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 MLLT11Q13015 90 aaPredicted RBP5.64□□□□□ -1.51
CLK1-210ENST00000473565 C6orf15Q6UXA7 325 aaPredicted RBP5.64□□□□□ -1.51
CLK1-210ENST00000473565 RPTNQ6XPR3 784 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 DPY19L2P2Q6ZN68 376 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 PLEKHG7Q6ZR37 379 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 GID4Q8IVV7 300 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 LRRC75AQ8NAA5 344 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 ZNF511Q8NB15 262 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 ZNF485Q8NCK3 441 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 NPEPL1Q8NDH3 523 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 TSPAN32Q96QS1 320 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 ALG8Q9BVK2 526 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 TMED9Q9BVK6 235 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 SLC19A3Q9BZV2 496 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 TPK1Q9H3S4 243 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 TIMMDC1Q9NPL8 285 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 HIF3AQ9Y2N7 669 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 GRIP1Q9Y3R0 1128 aa5.64□□□□□ -1.51
CLK1-210ENST00000473565 SPAARA0A1B0GVQ0 90 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 TMEM129A0AVI4 362 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 DAPL1A0PJW8 107 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 DKK1O94907 266 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 IFNGP01579 166 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 IGHA1P01876 353 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 INHBBP09529 407 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 SBK2P0C263 348 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 FBXO45P0C2W1 286 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 CLEC2LP0C7M8 214 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 CCL3P10147 92 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 HLA-DOBP13765 273 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 CELP19835 753 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 LCN1P31025 176 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 UQCRC1P31930 480 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 CASP3P42574 277 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 POLR2HP52434 150 aaKnown RBP5.63□□□□□ -1.51
CLK1-210ENST00000473565 LIMK1P53667 647 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 OR12D2P58182 307 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 C17orf67Q0P5P2 114 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 IL10RAQ13651 578 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 MELKQ14680 651 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 GLYR1Q49A26 553 aaPredicted RBP5.63□□□□□ -1.51
CLK1-210ENST00000473565 MESTQ5EB52 335 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 C1orf140Q5VVS0 124 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 C22orf42Q6IC83 251 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 C19orf48Q6RUI8 117 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 GRINAQ7Z429 371 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.63□□□□□ -1.51
CLK1-210ENST00000473565 WDFY1Q8IWB7 410 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 ACBD7Q8N6N7 88 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 C7orf57Q8NEG2 295 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 DEFB124Q8NES8 71 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 SLC22A8Q8TCC7 542 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 SMPDL3BQ92485 455 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 ZNF700Q9H0M5 742 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 SRA1Q9HD15 236 aaKnown RBP5.63□□□□□ -1.51
CLK1-210ENST00000473565 NDUFB11Q9NX14 153 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 TAS2R5Q9NYW4 299 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 RPH3AQ9Y2J0 694 aaPredicted RBP5.63□□□□□ -1.51
CLK1-210ENST00000473565 EXOSC1Q9Y3B2 195 aaKnown RBP5.63□□□□□ -1.51
CLK1-210ENST00000473565 TRAV36DV7A0A075B6V5 113 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 A0A1W2PQL4 384 aaPredicted RBP5.63□□□□□ -1.51
CLK1-210ENST00000473565 ANKUB1A6NFN9 424 aa5.63□□□□□ -1.51
CLK1-210ENST00000473565 TVP23AA6NH52 213 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms