RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 ZNF442Q9H7R0 627 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 OBP2BQ9NPH6 170 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 ESM1Q9NQ30 184 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.87□□□□□ -0.67
TRAF4-209ENST00000473421 EXD2Q9NVH0 621 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 MYEF2Q9P2K5 600 aaKnown RBP10.87□□□□□ -0.67
TRAF4-209ENST00000473421 SPEF1Q9Y4P9 236 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 TRRAPQ9Y4A5 3859 aa10.86□□□□□ -0.67
TRAF4-209ENST00000473421 ARHGAP32A7KAX9 2087 aa10.86□□□□□ -0.67
TRAF4-209ENST00000473421 AGAP5A6NIR3 686 aa10.86□□□□□ -0.67
TRAF4-209ENST00000473421 ZNF587BE7ETH6 402 aa10.86□□□□□ -0.67
TRAF4-209ENST00000473421 RNASET2O00584 256 aaKnown RBP10.86□□□□□ -0.67
TRAF4-209ENST00000473421 KRT33AO76009 404 aa10.86□□□□□ -0.67
TRAF4-209ENST00000473421 SNUPNO95149 360 aaKnown RBP10.86□□□□□ -0.67
TRAF4-209ENST00000473421 GUSBP08236 651 aa10.86□□□□□ -0.67
TRAF4-209ENST00000473421 CREB1P16220 341 aa10.86□□□□□ -0.67
TRAF4-209ENST00000473421 RPS4Y1P22090 263 aaKnown RBP10.86□□□□□ -0.67
TRAF4-209ENST00000473421 FKBP2P26885 142 aaKnown RBP10.86□□□□□ -0.67
TRAF4-209ENST00000473421 UBE2NP61088 152 aaKnown RBP10.86□□□□□ -0.67
TRAF4-209ENST00000473421 ROR2Q01974 943 aaKnown RBP10.86□□□□□ -0.67
TRAF4-209ENST00000473421 NPRL3Q12980 569 aa10.86□□□□□ -0.67
TRAF4-209ENST00000473421 MAD2L1BPQ15013 274 aaPredicted RBP10.86□□□□□ -0.67
TRAF4-209ENST00000473421 COX20Q5RI15 118 aa10.86□□□□□ -0.67
TRAF4-209ENST00000473421 PHYHD1Q5SRE7 291 aa10.86□□□□□ -0.67
TRAF4-209ENST00000473421 MRPL2Q5T653 305 aaKnown RBP10.86□□□□□ -0.67
TRAF4-209ENST00000473421 TMEM225Q6GV28 225 aa10.86□□□□□ -0.67
TRAF4-209ENST00000473421 KRT80Q6KB66 452 aa10.86□□□□□ -0.67
TRAF4-209ENST00000473421 MDP1Q86V88 176 aa10.86□□□□□ -0.67
TRAF4-209ENST00000473421 NATD1Q8N6N6 113 aa10.86□□□□□ -0.67
TRAF4-209ENST00000473421 PMM1Q92871 262 aa10.86□□□□□ -0.67
TRAF4-209ENST00000473421 TMEM186Q96B77 213 aa10.86□□□□□ -0.67
TRAF4-209ENST00000473421 SF3B5Q9BWJ5 86 aaKnown RBP10.86□□□□□ -0.67
TRAF4-209ENST00000473421 MRPL37Q9BZE1 423 aaKnown RBP10.86□□□□□ -0.67
TRAF4-209ENST00000473421 CHST2Q9Y4C5 530 aa10.86□□□□□ -0.67
TRAF4-209ENST00000473421 LOC105371242A0A075B767 164 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 B4DSR2 109 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 FRS3O43559 492 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 ITM2AO43736 263 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 SPAG7O75391 227 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 NCR1O76036 304 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 ZNF432O94892 652 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 GPIP06744 558 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 CBR1P16152 277 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 UQCRC2P22695 453 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 CDKN2CP42773 168 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 HTR3AP46098 478 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 LMO4P61968 165 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 EMX2Q04743 252 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 SNTB2Q13425 540 aaKnown RBP10.85□□□□□ -0.67
TRAF4-209ENST00000473421 C3orf36Q3SXR2 165 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 ATAD3BQ5T9A4 648 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 GLCCI1Q86VQ1 547 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 RNF130Q86XS8 419 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 VRK2Q86Y07 508 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 OR4F15Q8NGB8 312 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 KIF18AQ8NI77 898 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 MAGEE2Q8TD90 523 aaPredicted RBP10.85□□□□□ -0.67
TRAF4-209ENST00000473421 FAM216AQ8WUB2 273 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 ZFAND2BQ8WV99 257 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 NEURL3Q96EH8 262 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 TEX37Q96LM6 180 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 ZNF75AQ96N20 296 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 LRRC37BQ96QE4 947 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 RHOXF2Q9BQY4 288 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 AKTIPQ9H8T0 292 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 DYNLRB1Q9NP97 96 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 POLE3Q9NRF9 147 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 FZR1Q9UM11 496 aa10.85□□□□□ -0.67
TRAF4-209ENST00000473421 A0A0A6YYJ9 748 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 CFAP73A6NFT4 308 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 FTCDNL1E5RQL4 147 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 SLCO1B7G3V0H7 640 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 FAAHO00519 579 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 NPIPB7O75200 414 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 MSMBP08118 114 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 ALDH3B1P43353 468 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 CLDN17P56750 224 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 HILS1P60008 231 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 CASP8Q14790 479 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 SPANXN4Q5MJ08 99 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 C1QTNF12Q5T7M4 302 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 CLIP4Q8N3C7 705 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 FAM169BQ8N8A8 192 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 OR8J2Q8NGG1 315 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 SGMS2Q8NHU3 365 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 PNPT1Q8TCS8 783 aaKnown RBP10.84□□□□□ -0.67
TRAF4-209ENST00000473421 SYT3Q9BQG1 590 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 SLC35A5Q9BS91 424 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 PTDSS2Q9BVG9 487 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 C1QTNF5Q9BXJ0 243 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 RSPO3Q9BXY4 272 aaPredicted RBP10.84□□□□□ -0.67
TRAF4-209ENST00000473421 CRLF2Q9HC73 371 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 GPR35Q9HC97 309 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 B3GAT1Q9P2W7 334 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 MARCOQ9UEW3 520 aaPredicted RBP10.84□□□□□ -0.67
TRAF4-209ENST00000473421 PCDHB10Q9UN67 800 aa10.84□□□□□ -0.67
TRAF4-209ENST00000473421 PRSS51A0A1B0GVH4 220 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 HLA-HP01893 362 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 GSNP06396 782 aa10.83□□□□□ -0.68
TRAF4-209ENST00000473421 GAAP10253 952 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms