RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 WDR45Q9Y484 360 aa8.3□□□□□ -1.08
MCF2L-223ENST00000473345 HEATR1Q9H583 2144 aaKnown RBP8.29□□□□□ -1.08
MCF2L-223ENST00000473345 ARPC4-TTLL3A0A0A6YYG9 625 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 IGHV2OR16-5A0A0B4J2B6 119 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 TMEM89A2RUT3 159 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 GMNCA6NCL1 334 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 AQP7P3A6NL99 342 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 HMGN4O00479 90 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 NCR1O76036 304 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 SEC14L2O76054 403 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 IGKV3-15P01624 115 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 HPXP02790 462 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 KRT16P08779 473 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 GKN3PP0CG01 181 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 PRG2P13727 222 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 TCN1P20061 433 aaPredicted RBP8.29□□□□□ -1.08
MCF2L-223ENST00000473345 RPS4Y1P22090 263 aaKnown RBP8.29□□□□□ -1.08
MCF2L-223ENST00000473345 SRP14P37108 136 aaKnown RBP8.29□□□□□ -1.08
MCF2L-223ENST00000473345 RBMXP38159 391 aaKnown RBP8.29□□□□□ -1.08
MCF2L-223ENST00000473345 ACAA2P42765 397 aaKnown RBP8.29□□□□□ -1.08
MCF2L-223ENST00000473345 CLK1P49759 484 aaKnown RBP8.29□□□□□ -1.08
MCF2L-223ENST00000473345 CHN2P52757 468 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 SEC24CP53992 1094 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 DVL1P1P54792 670 aaPredicted RBP8.29□□□□□ -1.08
MCF2L-223ENST00000473345 CLDN8P56748 225 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 SLC35A1P78382 337 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 OR7A5Q15622 319 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 LSM12Q3MHD2 195 aaKnown RBP8.29□□□□□ -1.08
MCF2L-223ENST00000473345 COX20Q5RI15 118 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 CREB3L2Q70SY1 520 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 C16orf62Q7Z3J2 963 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 LRP11Q86VZ4 500 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 CCDC63Q8NA47 563 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 FNDC5Q8NAU1 212 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 ZHX1-C8orf76Q96EF9 292 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 TEX37Q96LM6 180 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 PPP3R2Q96LZ3 170 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 ZNF75AQ96N20 296 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 OCEL1Q9H607 264 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 EXOSC3Q9NQT5 275 aaKnown RBP8.29□□□□□ -1.08
MCF2L-223ENST00000473345 MID2Q9UJV3 735 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 SLC35A3Q9Y2D2 325 aa8.29□□□□□ -1.08
MCF2L-223ENST00000473345 AGAP5A6NIR3 686 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 TMEM114B3SHH9 223 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 ZNF208O43345 1280 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 FRS3O43559 492 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 ITM2AO43736 263 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 NPHS1O60500 1241 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 NPIPB7O75200 414 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 SNNO75324 88 aaPredicted RBP8.28□□□□□ -1.08
MCF2L-223ENST00000473345 LYPLA1O75608 230 aaPredicted RBP8.28□□□□□ -1.08
MCF2L-223ENST00000473345 PDE5AO76074 875 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 ZNF432O94892 652 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 WNT11O96014 354 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 AK1P00568 194 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 GUSBP08236 651 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 ADRA2AP08913 450 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 BMP4P12644 408 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 PRPS1L1P21108 318 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 DRD4P21917 467 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 CDKN2CP42773 168 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 POLR2HP52434 150 aaKnown RBP8.28□□□□□ -1.08
MCF2L-223ENST00000473345 LMO4P61968 165 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 ARF1P84077 181 aaKnown RBP8.28□□□□□ -1.08
MCF2L-223ENST00000473345 EPS8Q12929 822 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 MAD2L1BPQ15013 274 aaPredicted RBP8.28□□□□□ -1.08
MCF2L-223ENST00000473345 ADRM1Q16186 407 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 MRPL2Q5T653 305 aaKnown RBP8.28□□□□□ -1.08
MCF2L-223ENST00000473345 SPATA21Q7Z572 469 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 GPAT4Q86UL3 456 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 NUDCD3Q8IVD9 361 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 NATD1Q8N6N6 113 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 NUP37Q8NFH4 326 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 OR4A15Q8NGL6 344 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 UBASH3BQ8TF42 649 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 DYDC1Q8WWB3 177 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 TAF15Q92804 592 aaKnown RBP eCLIP8.28□□□□□ -1.08
MCF2L-223ENST00000473345 HPS1Q92902 700 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 MOAP1Q96BY2 351 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 MS4A3Q96HJ5 214 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 PPP1R36Q96LQ0 422 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 PTDSS2Q9BVG9 487 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 MRPL37Q9BZE1 423 aaKnown RBP8.28□□□□□ -1.08
MCF2L-223ENST00000473345 C20orf27Q9GZN8 174 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 ZNF442Q9H7R0 627 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 MYOZ1Q9NP98 299 aaPredicted RBP8.28□□□□□ -1.08
MCF2L-223ENST00000473345 SLC6A13Q9NSD5 602 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 TREM2Q9NZC2 230 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 ZNF224Q9NZL3 707 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 B3GAT1Q9P2W7 334 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 METRNQ9UJH8 293 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 PCDHGB4Q9UN71 923 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 SPEF1Q9Y4P9 236 aa8.28□□□□□ -1.08
MCF2L-223ENST00000473345 MGAM2Q2M2H8 2515 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 LOC105371242A0A075B767 164 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 FTCDNL1E5RQL4 147 aa8.27□□□□□ -1.09
MCF2L-223ENST00000473345 RNASET2O00584 256 aaKnown RBP8.27□□□□□ -1.09
MCF2L-223ENST00000473345 EDF1O60869 148 aaKnown RBP8.27□□□□□ -1.09
MCF2L-223ENST00000473345 CPSF4O95639 269 aaKnown RBP8.27□□□□□ -1.09
MCF2L-223ENST00000473345 FAM107AO95990 144 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms