RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 NPIPB7O75200 414 aa17.12■□□□□ 0.33
COMMD1-208ENST00000472729 MFN2O95140 757 aa17.12■□□□□ 0.33
COMMD1-208ENST00000472729 WNT11O96014 354 aa17.12■□□□□ 0.33
COMMD1-208ENST00000472729 ZNF83P51522 516 aa17.12■□□□□ 0.33
COMMD1-208ENST00000472729 GUCY1A3Q02108 690 aa17.12■□□□□ 0.33
COMMD1-208ENST00000472729 OR1Q1Q15612 314 aa17.12■□□□□ 0.33
COMMD1-208ENST00000472729 ZNF672Q499Z4 452 aaPredicted RBP17.12■□□□□ 0.33
COMMD1-208ENST00000472729 NIPAL3Q6P499 406 aa17.12■□□□□ 0.33
COMMD1-208ENST00000472729 SLC22A25Q6T423 547 aa17.12■□□□□ 0.33
COMMD1-208ENST00000472729 C6orf89Q6UWU4 347 aa17.12■□□□□ 0.33
COMMD1-208ENST00000472729 PRSS57Q6UWY2 283 aa17.12■□□□□ 0.33
COMMD1-208ENST00000472729 CREB3L2Q70SY1 520 aa17.12■□□□□ 0.33
COMMD1-208ENST00000472729 YTHDF3Q7Z739 585 aaKnown RBP17.12■□□□□ 0.33
COMMD1-208ENST00000472729 RETREG3Q86VR2 466 aa17.12■□□□□ 0.33
COMMD1-208ENST00000472729 C1orf162Q8NEQ5 155 aaPredicted RBP17.12■□□□□ 0.33
COMMD1-208ENST00000472729 SMAP2Q8WU79 429 aaPredicted RBP17.12■□□□□ 0.33
COMMD1-208ENST00000472729 KTI12Q96EK9 354 aaPredicted RBP17.12■□□□□ 0.33
COMMD1-208ENST00000472729 MUS81Q96NY9 551 aa17.12■□□□□ 0.33
COMMD1-208ENST00000472729 ZNF385AQ96PM9 386 aaKnown RBP17.12■□□□□ 0.33
COMMD1-208ENST00000472729 GID8Q9NWU2 228 aa17.12■□□□□ 0.33
COMMD1-208ENST00000472729 B3GALT5Q9Y2C3 310 aa17.12■□□□□ 0.33
COMMD1-208ENST00000472729 AMDHD2Q9Y303 409 aa17.12■□□□□ 0.33
COMMD1-208ENST00000472729 A0A1W2PR80 420 aa17.11■□□□□ 0.33
COMMD1-208ENST00000472729 DPRXA6NFQ7 191 aa17.11■□□□□ 0.33
COMMD1-208ENST00000472729 M0R1B8 84 aa17.11■□□□□ 0.33
COMMD1-208ENST00000472729 ABCD4O14678 606 aa17.11■□□□□ 0.33
COMMD1-208ENST00000472729 AKAP8O43823 692 aaKnown RBP17.11■□□□□ 0.33
COMMD1-208ENST00000472729 NPPAP01160 153 aa17.11■□□□□ 0.33
COMMD1-208ENST00000472729 C8BP07358 591 aa17.11■□□□□ 0.33
COMMD1-208ENST00000472729 PTAFRP25105 342 aa17.11■□□□□ 0.33
COMMD1-208ENST00000472729 HTR2AP28223 471 aa17.11■□□□□ 0.33
COMMD1-208ENST00000472729 NTF4P34130 210 aa17.11■□□□□ 0.33
COMMD1-208ENST00000472729 ATP5J2P56134 94 aa17.11■□□□□ 0.33
COMMD1-208ENST00000472729 PRPS1P60891 318 aa17.11■□□□□ 0.33
COMMD1-208ENST00000472729 DMTNQ08495 405 aa17.11■□□□□ 0.33
COMMD1-208ENST00000472729 GABRA6Q16445 453 aa17.11■□□□□ 0.33
COMMD1-208ENST00000472729 GLIPR1L2Q4G1C9 344 aa17.11■□□□□ 0.33
COMMD1-208ENST00000472729 SWT1Q5T5J6 900 aaKnown RBP17.11■□□□□ 0.33
COMMD1-208ENST00000472729 C1QTNF12Q5T7M4 302 aa17.11■□□□□ 0.33
COMMD1-208ENST00000472729 HMBOX1Q6NT76 420 aa17.11■□□□□ 0.33
COMMD1-208ENST00000472729 H1FNTQ75WM6 255 aaPredicted RBP17.11■□□□□ 0.33
COMMD1-208ENST00000472729 C18orf12Q96KH6 178 aa17.11■□□□□ 0.33
COMMD1-208ENST00000472729 MCHR1Q99705 422 aa17.11■□□□□ 0.33
COMMD1-208ENST00000472729 BDH2Q9BUT1 245 aa17.11■□□□□ 0.33
COMMD1-208ENST00000472729 ASPNQ9BXN1 380 aa17.11■□□□□ 0.33
COMMD1-208ENST00000472729 GSX2Q9BZM3 304 aa17.11■□□□□ 0.33
COMMD1-208ENST00000472729 ZNF446Q9NWS9 450 aa17.11■□□□□ 0.33
COMMD1-208ENST00000472729 CISD1Q9NZ45 108 aaKnown RBP17.11■□□□□ 0.33
COMMD1-208ENST00000472729 PRRC2AP48634 2157 aaKnown RBP17.11■□□□□ 0.33
COMMD1-208ENST00000472729 LOC100653049A0A140TA62 436 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 FAM171A2A8MVW0 826 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 MRASO14807 208 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 KRT34O76011 436 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 IFNA14P01570 189 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 OPN1SWP03999 348 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 ITGA5P08648 1049 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 PCGF2P35227 344 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 PTH2RP49190 550 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 CDH11P55287 796 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 UBE2NP61088 152 aaKnown RBP17.1■□□□□ 0.33
COMMD1-208ENST00000472729 SELPLGQ14242 412 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 COQ5Q5HYK3 327 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 NANOGP8Q6NSW7 305 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 PTOV1Q86YD1 416 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 ZIC4Q8N9L1 334 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 KBTBD8Q8NFY9 601 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 PROX1Q92786 737 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 TAAR8Q969N4 342 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 LRRC58Q96CX6 371 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 Q96MF0 132 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 OXGR1Q96P68 337 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 PRR14Q9BWN1 585 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 C1QTNF6Q9BXI9 259 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 NANOGQ9H9S0 305 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 CORINQ9Y5Q5 1042 aa17.1■□□□□ 0.33
COMMD1-208ENST00000472729 HEATR5AQ86XA9 2040 aa17.09■□□□□ 0.33
COMMD1-208ENST00000472729 TEP1Q99973 2627 aaKnown RBP17.09■□□□□ 0.33
COMMD1-208ENST00000472729 A0A087WUJ7 227 aa17.09■□□□□ 0.33
COMMD1-208ENST00000472729 M0R082 166 aa17.09■□□□□ 0.33
COMMD1-208ENST00000472729 FMO6PO60774 539 aa17.09■□□□□ 0.33
COMMD1-208ENST00000472729 SLC43A1O75387 559 aa17.09■□□□□ 0.33
COMMD1-208ENST00000472729 OR6A2O95222 327 aa17.09■□□□□ 0.33
COMMD1-208ENST00000472729 LGI1O95970 557 aa17.09■□□□□ 0.33
COMMD1-208ENST00000472729 CBLP22681 906 aa17.09■□□□□ 0.33
COMMD1-208ENST00000472729 GRPRP30550 384 aa17.09■□□□□ 0.33
COMMD1-208ENST00000472729 CLDN17P56750 224 aa17.09■□□□□ 0.33
COMMD1-208ENST00000472729 PCBP3P57721 371 aaKnown RBP17.09■□□□□ 0.33
COMMD1-208ENST00000472729 EGR4Q05215 589 aa17.09■□□□□ 0.33
COMMD1-208ENST00000472729 KLF10Q13118 480 aa17.09■□□□□ 0.33
COMMD1-208ENST00000472729 VMACQ2NL98 169 aa17.09■□□□□ 0.33
COMMD1-208ENST00000472729 ZNF613Q6PF04 617 aa17.09■□□□□ 0.33
COMMD1-208ENST00000472729 BIVMQ86UB2 503 aa17.09■□□□□ 0.33
COMMD1-208ENST00000472729 KDM8Q8N371 416 aa17.09■□□□□ 0.33
COMMD1-208ENST00000472729 OR8J3Q8NGG0 315 aa17.09■□□□□ 0.33
COMMD1-208ENST00000472729 VANGL1Q8TAA9 524 aaPredicted RBP17.09■□□□□ 0.33
COMMD1-208ENST00000472729 ZNF417Q8TAU3 575 aa17.09■□□□□ 0.33
COMMD1-208ENST00000472729 ZNF587Q96SQ5 575 aaPredicted RBP17.09■□□□□ 0.33
COMMD1-208ENST00000472729 KCNS3Q9BQ31 491 aa17.09■□□□□ 0.33
COMMD1-208ENST00000472729 PTDSS2Q9BVG9 487 aa17.09■□□□□ 0.33
COMMD1-208ENST00000472729 FKRPQ9H9S5 495 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms