RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 HRNRQ86YZ3 2850 aaPredicted RBP8.16□□□□□ -1.1
SMC4-213ENST00000472282 A0A0B4J2E0 115 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 A0A1B0GX12 115 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 ZC3H12DA2A288 527 aaKnown RBP8.15□□□□□ -1.1
SMC4-213ENST00000472282 GJE1A6NN92 205 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 CXCL13O43927 109 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 FMO6PO60774 539 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 TNFSF13O75888 250 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 RCBTB2O95199 551 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 IL18BPO95998 194 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 WNT11O96014 354 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 PTNP21246 168 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 ATP6V1B2P21281 511 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 CXCR1P25024 350 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 OPRM1P35372 400 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 POU4F3Q15319 338 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 SF3B4Q15427 424 aaKnown RBP eCLIP8.15□□□□□ -1.12e-8■■■■□ 23.1
SMC4-213ENST00000472282 OR1Q1Q15612 314 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 SGCBQ16585 318 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 IFI44LQ53G44 452 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 ENTPD8Q5MY95 495 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 HBMQ6B0K9 141 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 DEF8Q6ZN54 512 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 CHMP1BQ7LBR1 199 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 ATG4DQ86TL0 474 aaPredicted RBP8.15□□□□□ -1.1
SMC4-213ENST00000472282 TSPYL5Q86VY4 417 aaPredicted RBP8.15□□□□□ -1.1
SMC4-213ENST00000472282 FAM86B1Q8N7N1 296 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 LSMEM1Q8N8F7 131 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 UBASH3BQ8TF42 649 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 FAM222BQ8WU58 562 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 SLC25A43Q8WUT9 341 aaPredicted RBP8.15□□□□□ -1.1
SMC4-213ENST00000472282 ARL5BQ96KC2 179 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 NSMCE2Q96MF7 247 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 BTBD10Q9BSF8 475 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 SRXN1Q9BYN0 137 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 OR11A1Q9GZK7 315 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 TMEM27Q9HBJ8 222 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 DCAF13Q9NV06 445 aaKnown RBP8.15□□□□□ -1.1
SMC4-213ENST00000472282 GALNT8Q9NY28 637 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.15□□□□□ -1.1
SMC4-213ENST00000472282 ST6GALNAC2Q9UJ37 374 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 RPS6KA6Q9UK32 745 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 SPG11Q96JI7 2443 aa8.15□□□□□ -1.1
SMC4-213ENST00000472282 HIVEP1P15822 2718 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 TUBAL3A6NHL2 446 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 SLC22A20A6NK97 555 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 ADAMDEC1O15204 470 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 DNAJC8O75937 253 aaPredicted RBP8.14□□□□□ -1.11
SMC4-213ENST00000472282 ATP5HO75947 161 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 RASSF2P50749 326 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 DAZAP2Q15038 168 aaPredicted RBP8.14□□□□□ -1.11
SMC4-213ENST00000472282 PON3Q15166 354 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 ZNF239Q16600 458 aaKnown RBP8.14□□□□□ -1.11
SMC4-213ENST00000472282 ALG10BQ5I7T1 473 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 PDSS1Q5T2R2 415 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 VWA1Q6PCB0 445 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 ZNF613Q6PF04 617 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 ULK3Q6PHR2 472 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 CYP2R1Q6VVX0 501 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 BEND4Q6ZU67 534 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 CCDC121Q6ZUS5 278 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 FKBP9P1Q75LS8 142 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 P4HA3Q7Z4N8 544 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 FNDC9Q8TBE3 224 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 ADAMTS16Q8TE57 1224 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 DNAJA4Q8WW22 397 aaPredicted RBP8.14□□□□□ -1.11
SMC4-213ENST00000472282 GEMIN6Q8WXD5 167 aaKnown RBP8.14□□□□□ -1.11
SMC4-213ENST00000472282 DDIT4LQ96D03 193 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 TM9SF2Q99805 663 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 RBM24Q9BX46 236 aaKnown RBP8.14□□□□□ -1.11
SMC4-213ENST00000472282 CADM1Q9BY67 442 aaKnown RBP8.14□□□□□ -1.11
SMC4-213ENST00000472282 CXXC4Q9H2H0 198 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 MUC13Q9H3R2 512 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 GORASP2Q9H8Y8 452 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 C12orf10Q9HB07 376 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 SELENONQ9NZV5 590 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 ACTR3BQ9P1U1 418 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 FOXD3Q9UJU5 478 aaPredicted RBP8.14□□□□□ -1.11
SMC4-213ENST00000472282 PRDM4Q9UKN5 801 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 MCTS1Q9ULC4 181 aaKnown RBP8.14□□□□□ -1.11
SMC4-213ENST00000472282 SAMD4AQ9UPU9 718 aaKnown RBP8.14□□□□□ -1.11
SMC4-213ENST00000472282 RNF114Q9Y508 228 aa8.14□□□□□ -1.11
SMC4-213ENST00000472282 CELSR1Q9NYQ6 3014 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 A0A1W2PNV4 684 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 TRAPPC13A5PLN9 417 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 A8MVM7 634 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 A8MXE2 369 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 SULT2B1O00204 365 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 EBAG9O00559 213 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 ZNF208O43345 1280 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 CHP2O43745 196 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 AQP8O94778 261 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 PRKD3O94806 890 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 LYPD3O95274 346 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 SYNGR4O95473 234 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 THY1P04216 161 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 IFNW1P05000 195 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 IMPDH2P12268 514 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 YAP1P46937 504 aaKnown RBP8.13□□□□□ -1.11
SMC4-213ENST00000472282 CLK1P49759 484 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms