RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 CDS1Q92903 461 aa8.68□□□□□ -1.02
CDHR3-209ENST00000472116 DDIT4LQ96D03 193 aa8.68□□□□□ -1.02
CDHR3-209ENST00000472116 ELMOD3Q96FG2 381 aa8.68□□□□□ -1.02
CDHR3-209ENST00000472116 APIPQ96GX9 242 aa8.68□□□□□ -1.02
CDHR3-209ENST00000472116 NSUN5Q96P11 429 aaKnown RBP8.68□□□□□ -1.02
CDHR3-209ENST00000472116 DIRC2Q96SL1 478 aa8.68□□□□□ -1.02
CDHR3-209ENST00000472116 STACQ99469 402 aa8.68□□□□□ -1.02
CDHR3-209ENST00000472116 SF3B5Q9BWJ5 86 aaKnown RBP8.68□□□□□ -1.02
CDHR3-209ENST00000472116 LAT2Q9GZY6 243 aa8.68□□□□□ -1.02
CDHR3-209ENST00000472116 VPS11Q9H270 941 aa8.68□□□□□ -1.02
CDHR3-209ENST00000472116 SERHL2Q9H4I8 314 aa8.68□□□□□ -1.02
CDHR3-209ENST00000472116 SAP30LQ9HAJ7 183 aa8.68□□□□□ -1.02
CDHR3-209ENST00000472116 HINT3Q9NQE9 182 aaKnown RBP8.68□□□□□ -1.02
CDHR3-209ENST00000472116 DUSP22Q9NRW4 184 aa8.68□□□□□ -1.02
CDHR3-209ENST00000472116 SLC6A13Q9NSD5 602 aa8.68□□□□□ -1.02
CDHR3-209ENST00000472116 ACER3Q9NUN7 267 aa8.68□□□□□ -1.02
CDHR3-209ENST00000472116 FZR1Q9UM11 496 aa8.68□□□□□ -1.02
CDHR3-209ENST00000472116 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.68□□□□□ -1.02
CDHR3-209ENST00000472116 POMT1Q9Y6A1 747 aa8.68□□□□□ -1.02
CDHR3-209ENST00000472116 TRIM49D1C9J1S8 452 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 C3orf84H3BNL1 204 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 MANBAO00462 879 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 SFTPBP07988 381 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 BCKDHAP12694 445 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 TSPAN8P19075 237 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 H3F3AP84243 136 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 ROR2Q01974 943 aaKnown RBP8.67□□□□□ -1.02
CDHR3-209ENST00000472116 FASTKD3Q14CZ7 662 aaKnown RBP8.67□□□□□ -1.02
CDHR3-209ENST00000472116 DEFB112Q30KQ8 113 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 NRN1LQ496H8 165 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 OXLD1Q5BKU9 147 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 SPDYAQ5MJ70 313 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 DCST2Q5T1A1 773 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 TMEM225Q6GV28 225 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 GRINAQ7Z429 371 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 MDP1Q86V88 176 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 LRP11Q86VZ4 500 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 CMIPQ8IY22 773 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 KLHL36Q8N4N3 616 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 CPEB3Q8NE35 698 aaKnown RBP8.67□□□□□ -1.02
CDHR3-209ENST00000472116 TBC1D15Q8TC07 691 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 PYROXD1Q8WU10 500 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 DCAKDQ8WVC6 231 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 CCL17Q92583 94 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 ZNF524Q96C55 264 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 FAM71F1Q96KD3 344 aaPredicted RBP8.67□□□□□ -1.02
CDHR3-209ENST00000472116 ZNF385AQ96PM9 386 aaKnown RBP8.67□□□□□ -1.02
CDHR3-209ENST00000472116 OR11A1Q9GZK7 315 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 PIF1Q9H611 641 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 CTPS2Q9NRF8 586 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 NKIRAS2Q9NYR9 191 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 DSPPQ9NZW4 1301 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 TAAR3PQ9P1P4 343 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 MYEF2Q9P2K5 600 aaKnown RBP8.67□□□□□ -1.02
CDHR3-209ENST00000472116 PCDHGB4Q9UN71 923 aa8.67□□□□□ -1.02
CDHR3-209ENST00000472116 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 PGRMC1O00264 195 aaKnown RBP8.66□□□□□ -1.02
CDHR3-209ENST00000472116 OR4F21O95013 312 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 KLHL2O95198 593 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 PLATP00750 562 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 CSTAP01040 98 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 KRT16P08779 473 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 UBTFL6P0CB48 400 aaPredicted RBP8.66□□□□□ -1.02
CDHR3-209ENST00000472116 PPIAL4GP0DN37 164 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 CHN1P15882 459 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 CCNA2P20248 432 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 FUT4P22083 530 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 KLF3P57682 345 aaPredicted RBP8.66□□□□□ -1.02
CDHR3-209ENST00000472116 SKP2Q13309 424 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 LARS2Q15031 903 aaKnown RBP8.66□□□□□ -1.02
CDHR3-209ENST00000472116 MSMPQ1L6U9 139 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 PRSS53Q2L4Q9 553 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 FAM209AQ5JX71 171 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.66□□□□□ -1.02
CDHR3-209ENST00000472116 FAM71E1Q6IPT2 247 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 RGS7BPQ6MZT1 257 aaPredicted RBP8.66□□□□□ -1.02
CDHR3-209ENST00000472116 NIPAL3Q6P499 406 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 CENPLQ8N0S6 344 aaPredicted RBP8.66□□□□□ -1.02
CDHR3-209ENST00000472116 SPICQ8N5J4 248 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 ADAMTS15Q8TE58 950 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 PMM1Q92871 262 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 GIMAP5Q96F15 307 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 C16orf58Q96GQ5 468 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 ACTRT3Q9BYD9 372 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 ACPTQ9BZG2 426 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 PIGUQ9H490 435 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 SIRT3Q9NTG7 399 aaPredicted RBP8.66□□□□□ -1.02
CDHR3-209ENST00000472116 SLCO1C1Q9NYB5 712 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 IL20RAQ9UHF4 553 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 SLC7A8Q9UHI5 535 aa8.66□□□□□ -1.02
CDHR3-209ENST00000472116 SOX21Q9Y651 276 aaPredicted RBP8.66□□□□□ -1.02
CDHR3-209ENST00000472116 TRAPPC2LH3BP13 241 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 RSL1D1O76021 490 aaKnown RBP8.65□□□□□ -1.02
CDHR3-209ENST00000472116 DRD4P21917 467 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 SSTR1P30872 391 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 SELENOPP49908 381 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 BPIFB3P59826 476 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 ARF1P84077 181 aaKnown RBP8.65□□□□□ -1.02
CDHR3-209ENST00000472116 BST1Q10588 318 aa8.65□□□□□ -1.02
CDHR3-209ENST00000472116 LASP1Q14847 261 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms