RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 FAM153CQ494X1 144 aa16.32■□□□□ 0.2
SORT1-203ENST00000471996 ZNF311Q5JNZ3 666 aa16.32■□□□□ 0.2
SORT1-203ENST00000471996 REP15Q6BDI9 236 aa16.32■□□□□ 0.2
SORT1-203ENST00000471996 TYW3Q6IPR3 259 aaKnown RBP16.32■□□□□ 0.2
SORT1-203ENST00000471996 CREB3L2Q70SY1 520 aa16.32■□□□□ 0.2
SORT1-203ENST00000471996 EXD2Q9NVH0 621 aa16.32■□□□□ 0.2
SORT1-203ENST00000471996 DCDC2Q9UHG0 476 aa16.32■□□□□ 0.2
SORT1-203ENST00000471996 FIS1Q9Y3D6 152 aa16.32■□□□□ 0.2
SORT1-203ENST00000471996 WDR45Q9Y484 360 aa16.32■□□□□ 0.2
SORT1-203ENST00000471996 VWFP04275 2813 aa16.31■□□□□ 0.2
SORT1-203ENST00000471996 CLDN24A6NM45 220 aa16.31■□□□□ 0.2
SORT1-203ENST00000471996 TMEM229AB2RXF0 380 aa16.31■□□□□ 0.2
SORT1-203ENST00000471996 J3QLI3 93 aa16.31■□□□□ 0.2
SORT1-203ENST00000471996 AP3D1O14617 1153 aa16.31■□□□□ 0.2
SORT1-203ENST00000471996 MPZL1O95297 269 aa16.31■□□□□ 0.2
SORT1-203ENST00000471996 GSNP06396 782 aa16.31■□□□□ 0.2
SORT1-203ENST00000471996 NR4A1P22736 598 aa16.31■□□□□ 0.2
SORT1-203ENST00000471996 FPR2P25090 351 aa16.31■□□□□ 0.2
SORT1-203ENST00000471996 SOAT1P35610 550 aa16.31■□□□□ 0.2
SORT1-203ENST00000471996 NPRL3Q12980 569 aa16.31■□□□□ 0.2
SORT1-203ENST00000471996 OR7A5Q15622 319 aa16.31■□□□□ 0.2
SORT1-203ENST00000471996 TMEM225Q6GV28 225 aa16.31■□□□□ 0.2
SORT1-203ENST00000471996 NIPAL3Q6P499 406 aa16.31■□□□□ 0.2
SORT1-203ENST00000471996 RNF217Q8TC41 542 aa16.31■□□□□ 0.2
SORT1-203ENST00000471996 ZG16BQ96DA0 208 aa16.31■□□□□ 0.2
SORT1-203ENST00000471996 ZNF416Q9BWM5 594 aa16.31■□□□□ 0.2
SORT1-203ENST00000471996 LINC00470Q9BZP3 86 aa16.31■□□□□ 0.2
SORT1-203ENST00000471996 ZNF665Q9H7R5 613 aa16.31■□□□□ 0.2
SORT1-203ENST00000471996 CRLF2Q9HC73 371 aa16.31■□□□□ 0.2
SORT1-203ENST00000471996 POLE3Q9NRF9 147 aa16.31■□□□□ 0.2
SORT1-203ENST00000471996 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.31■□□□□ 0.2
SORT1-203ENST00000471996 DNAJC15Q9Y5T4 150 aa16.31■□□□□ 0.2
SORT1-203ENST00000471996 ZNF503-AS2A6NEH8 195 aa16.3■□□□□ 0.2
SORT1-203ENST00000471996 PLPP2O43688 288 aa16.3■□□□□ 0.2
SORT1-203ENST00000471996 LYPLA1O75608 230 aaPredicted RBP16.3■□□□□ 0.2
SORT1-203ENST00000471996 RP2O75695 350 aa16.3■□□□□ 0.2
SORT1-203ENST00000471996 PRSS23O95084 383 aa16.3■□□□□ 0.2
SORT1-203ENST00000471996 ZFP36P26651 326 aaKnown RBP16.3■□□□□ 0.2
SORT1-203ENST00000471996 ALDH3B1P43353 468 aa16.3■□□□□ 0.2
SORT1-203ENST00000471996 P2RY4P51582 365 aa16.3■□□□□ 0.2
SORT1-203ENST00000471996 SEC24CP53992 1094 aa16.3■□□□□ 0.2
SORT1-203ENST00000471996 ARF1P84077 181 aaKnown RBP16.3■□□□□ 0.2
SORT1-203ENST00000471996 ROR2Q01974 943 aaKnown RBP16.3■□□□□ 0.2
SORT1-203ENST00000471996 PTGR1Q14914 329 aa16.3■□□□□ 0.2
SORT1-203ENST00000471996 OCLNQ16625 522 aa16.3■□□□□ 0.2
SORT1-203ENST00000471996 C8orf74Q6P047 294 aa16.3■□□□□ 0.2
SORT1-203ENST00000471996 C22orf15Q8WYQ4 148 aa16.3■□□□□ 0.2
SORT1-203ENST00000471996 CNOT9Q92600 299 aaKnown RBP16.3■□□□□ 0.2
SORT1-203ENST00000471996 SLC35G5Q96KT7 338 aa16.3■□□□□ 0.2
SORT1-203ENST00000471996 PRPF18Q99633 342 aaKnown RBP16.3■□□□□ 0.2
SORT1-203ENST00000471996 OXSMQ9NWU1 459 aa16.3■□□□□ 0.2
SORT1-203ENST00000471996 CORINQ9Y5Q5 1042 aa16.3■□□□□ 0.2
SORT1-203ENST00000471996 POM121CA8CG34 1229 aa16.29■□□□□ 0.2
SORT1-203ENST00000471996 RPL36A-HNRNPH2H7BZ11 118 aa16.29■□□□□ 0.2
SORT1-203ENST00000471996 VAMP5O95183 116 aa16.29■□□□□ 0.2
SORT1-203ENST00000471996 CHEK2O96017 543 aa16.29■□□□□ 0.2
SORT1-203ENST00000471996 FSHBP01225 129 aa16.29■□□□□ 0.2
SORT1-203ENST00000471996 MAPK1P28482 360 aa16.29■□□□□ 0.2
SORT1-203ENST00000471996 ZP4Q12836 540 aa16.29■□□□□ 0.2
SORT1-203ENST00000471996 HIST2H2BDQ6DRA6 164 aa16.29■□□□□ 0.2
SORT1-203ENST00000471996 FRRS1Q6ZNA5 592 aa16.29■□□□□ 0.2
SORT1-203ENST00000471996 ZNF572Q7Z3I7 529 aaPredicted RBP16.29■□□□□ 0.2
SORT1-203ENST00000471996 HMGN2P46Q86SG4 172 aa16.29■□□□□ 0.2
SORT1-203ENST00000471996 MDP1Q86V88 176 aa16.29■□□□□ 0.2
SORT1-203ENST00000471996 EPHX4Q8IUS5 362 aa16.29■□□□□ 0.2
SORT1-203ENST00000471996 CLEC4FQ8N1N0 589 aa16.29■□□□□ 0.2
SORT1-203ENST00000471996 ANKK1Q8NFD2 765 aa16.29■□□□□ 0.2
SORT1-203ENST00000471996 MIPOL1Q8TD10 442 aa16.29■□□□□ 0.2
SORT1-203ENST00000471996 FMO2Q99518 471 aa16.29■□□□□ 0.2
SORT1-203ENST00000471996 SYT3Q9BQG1 590 aa16.29■□□□□ 0.2
SORT1-203ENST00000471996 OR51I1Q9H343 314 aa16.29■□□□□ 0.2
SORT1-203ENST00000471996 MED29Q9NX70 200 aa16.29■□□□□ 0.2
SORT1-203ENST00000471996 SCN2BO60939 215 aa16.28■□□□□ 0.2
SORT1-203ENST00000471996 NCR1O76036 304 aa16.28■□□□□ 0.2
SORT1-203ENST00000471996 AGR2O95994 175 aa16.28■□□□□ 0.2
SORT1-203ENST00000471996 PROCP04070 461 aa16.28■□□□□ 0.2
SORT1-203ENST00000471996 OR12D1P0DN82 309 aa16.28■□□□□ 0.2
SORT1-203ENST00000471996 PRTN3P24158 256 aa16.28■□□□□ 0.2
SORT1-203ENST00000471996 ATAD3BQ5T9A4 648 aa16.28■□□□□ 0.2
SORT1-203ENST00000471996 DCAF12L2Q5VW00 463 aa16.28■□□□□ 0.2
SORT1-203ENST00000471996 KANK2Q63ZY3 851 aa16.28■□□□□ 0.2
SORT1-203ENST00000471996 RBMS3Q6XE24 437 aaKnown RBP16.28■□□□□ 0.2
SORT1-203ENST00000471996 KRTCAP2Q8N6L1 136 aa16.28■□□□□ 0.2
SORT1-203ENST00000471996 XAGE5Q8WWM1 108 aa16.28■□□□□ 0.2
SORT1-203ENST00000471996 DVL3Q92997 716 aaPredicted RBP16.28■□□□□ 0.2
SORT1-203ENST00000471996 ROPN1LQ96C74 230 aa16.28■□□□□ 0.2
SORT1-203ENST00000471996 LRRC58Q96CX6 371 aa16.28■□□□□ 0.2
SORT1-203ENST00000471996 DUSP26Q9BV47 211 aa16.28■□□□□ 0.2
SORT1-203ENST00000471996 C1QTNF5Q9BXJ0 243 aa16.28■□□□□ 0.2
SORT1-203ENST00000471996 SLITRK2Q9H156 845 aa16.28■□□□□ 0.2
SORT1-203ENST00000471996 GIMAP2Q9UG22 337 aa16.28■□□□□ 0.2
SORT1-203ENST00000471996 RNF103-CHMP3A0A140T963 221 aa16.27■□□□□ 0.2
SORT1-203ENST00000471996 FAAHO00519 579 aa16.27■□□□□ 0.2
SORT1-203ENST00000471996 GLRA3O75311 464 aa16.27■□□□□ 0.2
SORT1-203ENST00000471996 DEAF1O75398 565 aaPredicted RBP16.27■□□□□ 0.2
SORT1-203ENST00000471996 GLRXP35754 106 aa16.27■□□□□ 0.2
SORT1-203ENST00000471996 IL13RA1P78552 427 aa16.27■□□□□ 0.2
SORT1-203ENST00000471996 FUT5Q11128 374 aa16.27■□□□□ 0.2
SORT1-203ENST00000471996 MAD2L1BPQ15013 274 aaPredicted RBP16.27■□□□□ 0.2
SORT1-203ENST00000471996 TUSC1Q2TAM9 212 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms