RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 C5orf58C9J3I9 102 aa19.72■□□□□ 0.75
C9orf3-213ENST00000471978 POLR3GO15318 223 aaPredicted RBP19.72■□□□□ 0.75
C9orf3-213ENST00000471978 AHSA1O95433 338 aa19.72■□□□□ 0.75
C9orf3-213ENST00000471978 BMP2P12643 396 aa19.72■□□□□ 0.75
C9orf3-213ENST00000471978 HOXB9P17482 250 aaPredicted RBP19.72■□□□□ 0.75
C9orf3-213ENST00000471978 CR1P17927 2039 aa19.72■□□□□ 0.75
C9orf3-213ENST00000471978 MRPL19P49406 292 aaKnown RBP19.72■□□□□ 0.75
C9orf3-213ENST00000471978 RAB35Q15286 201 aa19.72■□□□□ 0.75
C9orf3-213ENST00000471978 TMEM45AQ9NWC5 275 aa19.72■□□□□ 0.75
C9orf3-213ENST00000471978 ADAM21Q9UKJ8 722 aa19.72■□□□□ 0.75
C9orf3-213ENST00000471978 RASD1Q9Y272 281 aa19.72■□□□□ 0.75
C9orf3-213ENST00000471978 ALPK2Q86TB3 2170 aa19.71■□□□□ 0.75
C9orf3-213ENST00000471978 ABCA1O95477 2261 aa19.71■□□□□ 0.75
C9orf3-213ENST00000471978 ZNF587BE7ETH6 402 aa19.71■□□□□ 0.75
C9orf3-213ENST00000471978 TGDSO95455 350 aa19.71■□□□□ 0.75
C9orf3-213ENST00000471978 SELENOPP49908 381 aa19.71■□□□□ 0.75
C9orf3-213ENST00000471978 LGALS3BPQ08380 585 aa19.71■□□□□ 0.75
C9orf3-213ENST00000471978 MFSD8Q8NHS3 518 aa19.71■□□□□ 0.75
C9orf3-213ENST00000471978 HTRA1Q92743 480 aa19.71■□□□□ 0.75
C9orf3-213ENST00000471978 SLC35B4Q969S0 331 aa19.71■□□□□ 0.75
C9orf3-213ENST00000471978 SLC25A36Q96CQ1 311 aa19.71■□□□□ 0.75
C9orf3-213ENST00000471978 SLC25A37Q9NYZ2 338 aa19.71■□□□□ 0.75
C9orf3-213ENST00000471978 FBN1P35555 2871 aaKnown RBP19.71■□□□□ 0.75
C9orf3-213ENST00000471978 IGHV4-30-2A0A087WSY4 118 aa19.7■□□□□ 0.74
C9orf3-213ENST00000471978 ELOA3DA6NLF2 546 aaPredicted RBP19.7■□□□□ 0.74
C9orf3-213ENST00000471978 FTCDNL1E5RQL4 147 aa19.7■□□□□ 0.74
C9orf3-213ENST00000471978 ATP6V1G2-DDX39BF2Z307 99 aa19.7■□□□□ 0.74
C9orf3-213ENST00000471978 CD5LO43866 347 aa19.7■□□□□ 0.74
C9orf3-213ENST00000471978 LGI1O95970 557 aa19.7■□□□□ 0.74
C9orf3-213ENST00000471978 ETS2P15036 469 aa19.7■□□□□ 0.74
C9orf3-213ENST00000471978 RPS5P46782 204 aaKnown RBP19.7■□□□□ 0.74
C9orf3-213ENST00000471978 IDH3AP50213 366 aa19.7■□□□□ 0.74
C9orf3-213ENST00000471978 DSCR9P59020 149 aa19.7■□□□□ 0.74
C9orf3-213ENST00000471978 ELOA3BQ3SY89 546 aa19.7■□□□□ 0.74
C9orf3-213ENST00000471978 AGBL2Q5U5Z8 902 aa19.7■□□□□ 0.74
C9orf3-213ENST00000471978 NIPAL3Q6P499 406 aa19.7■□□□□ 0.74
C9orf3-213ENST00000471978 BLOC1S3Q6QNY0 202 aa19.7■□□□□ 0.74
C9orf3-213ENST00000471978 CLEC2AQ6UVW9 174 aa19.7■□□□□ 0.74
C9orf3-213ENST00000471978 EPHX4Q8IUS5 362 aa19.7■□□□□ 0.74
C9orf3-213ENST00000471978 FUNDC1Q8IVP5 155 aa19.7■□□□□ 0.74
C9orf3-213ENST00000471978 ELOA3Q8NG57 546 aa19.7■□□□□ 0.74
C9orf3-213ENST00000471978 LRRC8CQ8TDW0 803 aa19.7■□□□□ 0.74
C9orf3-213ENST00000471978 BOD1Q96IK1 185 aa19.7■□□□□ 0.74
C9orf3-213ENST00000471978 SLCO1B3Q9NPD5 702 aa19.7■□□□□ 0.74
C9orf3-213ENST00000471978 SLAMF8Q9P0V8 285 aa19.7■□□□□ 0.74
C9orf3-213ENST00000471978 RPS6KB2Q9UBS0 482 aa19.7■□□□□ 0.74
C9orf3-213ENST00000471978 HEATR1Q9H583 2144 aaKnown RBP19.7■□□□□ 0.74
C9orf3-213ENST00000471978 COL6A5A8TX70 2615 aa19.69■□□□□ 0.74
C9orf3-213ENST00000471978 OR6C65A6NJZ3 312 aa19.69■□□□□ 0.74
C9orf3-213ENST00000471978 H7C417 338 aa19.69■□□□□ 0.74
C9orf3-213ENST00000471978 PNMTP11086 282 aa19.69■□□□□ 0.74
C9orf3-213ENST00000471978 BMP4P12644 408 aa19.69■□□□□ 0.74
C9orf3-213ENST00000471978 GTF2E2P29084 291 aaKnown RBP19.69■□□□□ 0.74
C9orf3-213ENST00000471978 APOBEC3AP31941 199 aaPredicted RBP19.69■□□□□ 0.74
C9orf3-213ENST00000471978 EGR4Q05215 589 aa19.69■□□□□ 0.74
C9orf3-213ENST00000471978 CHRNB3Q05901 458 aa19.69■□□□□ 0.74
C9orf3-213ENST00000471978 TBRG1Q3YBR2 411 aa19.69■□□□□ 0.74
C9orf3-213ENST00000471978 LRIF1Q5T3J3 769 aa19.69■□□□□ 0.74
C9orf3-213ENST00000471978 MSRB3Q8IXL7 192 aa19.69■□□□□ 0.74
C9orf3-213ENST00000471978 KDM8Q8N371 416 aa19.69■□□□□ 0.74
C9orf3-213ENST00000471978 OR10H5Q8NGA6 315 aa19.69■□□□□ 0.74
C9orf3-213ENST00000471978 OR1K1Q8NGR3 316 aa19.69■□□□□ 0.74
C9orf3-213ENST00000471978 NFKBIDQ8NI38 313 aa19.69■□□□□ 0.74
C9orf3-213ENST00000471978 SPDL1Q96EA4 605 aa19.69■□□□□ 0.74
C9orf3-213ENST00000471978 KTI12Q96EK9 354 aaPredicted RBP19.69■□□□□ 0.74
C9orf3-213ENST00000471978 ALKBH3Q96Q83 286 aaPredicted RBP19.69■□□□□ 0.74
C9orf3-213ENST00000471978 MDFIQ99750 246 aa19.69■□□□□ 0.74
C9orf3-213ENST00000471978 EBF4Q9BQW3 602 aa19.69■□□□□ 0.74
C9orf3-213ENST00000471978 PTDSS2Q9BVG9 487 aa19.69■□□□□ 0.74
C9orf3-213ENST00000471978 OBP2BQ9NPH6 170 aa19.69■□□□□ 0.74
C9orf3-213ENST00000471978 YAE1D1Q9NRH1 226 aa19.69■□□□□ 0.74
C9orf3-213ENST00000471978 CCDC167Q9P0B6 97 aa19.69■□□□□ 0.74
C9orf3-213ENST00000471978 MOKQ9UQ07 419 aa19.69■□□□□ 0.74
C9orf3-213ENST00000471978 NR5A2O00482 541 aa19.68■□□□□ 0.74
C9orf3-213ENST00000471978 TLX2O43763 284 aaPredicted RBP19.68■□□□□ 0.74
C9orf3-213ENST00000471978 UPK3AO75631 287 aa19.68■□□□□ 0.74
C9orf3-213ENST00000471978 PRKAR1BP31321 381 aa19.68■□□□□ 0.74
C9orf3-213ENST00000471978 GCNT6Q5T4J0 391 aa19.68■□□□□ 0.74
C9orf3-213ENST00000471978 CCDC28BQ9BUN5 200 aa19.68■□□□□ 0.74
C9orf3-213ENST00000471978 RSPO3Q9BXY4 272 aaPredicted RBP19.68■□□□□ 0.74
C9orf3-213ENST00000471978 PMF1-BGLAPU3KQ54 211 aa19.68■□□□□ 0.74
C9orf3-213ENST00000471978 MXRA5Q9NR99 2828 aa19.68■□□□□ 0.74
C9orf3-213ENST00000471978 ARAFP10398 606 aa19.67■□□□□ 0.74
C9orf3-213ENST00000471978 PPIBP23284 216 aaKnown RBP19.67■□□□□ 0.74
C9orf3-213ENST00000471978 CLDN17P56750 224 aa19.67■□□□□ 0.74
C9orf3-213ENST00000471978 UBE2NP61088 152 aaKnown RBP19.67■□□□□ 0.74
C9orf3-213ENST00000471978 PAGE3Q5JUK9 113 aa19.67■□□□□ 0.74
C9orf3-213ENST00000471978 REEP3Q6NUK4 255 aa19.67■□□□□ 0.74
C9orf3-213ENST00000471978 C6orf89Q6UWU4 347 aa19.67■□□□□ 0.74
C9orf3-213ENST00000471978 LINGO2Q7L985 606 aa19.67■□□□□ 0.74
C9orf3-213ENST00000471978 KRT73Q86Y46 540 aa19.67■□□□□ 0.74
C9orf3-213ENST00000471978 C10orf111Q8N326 155 aa19.67■□□□□ 0.74
C9orf3-213ENST00000471978 ZNF525Q8N782 197 aa19.67■□□□□ 0.74
C9orf3-213ENST00000471978 BCL2L2Q92843 193 aaPredicted RBP19.67■□□□□ 0.74
C9orf3-213ENST00000471978 SLC38A2Q96QD8 506 aa19.67■□□□□ 0.74
C9orf3-213ENST00000471978 SPATA5L1Q9BVQ7 753 aa19.67■□□□□ 0.74
C9orf3-213ENST00000471978 LINC00470Q9BZP3 86 aa19.67■□□□□ 0.74
C9orf3-213ENST00000471978 C12orf10Q9HB07 376 aa19.67■□□□□ 0.74
C9orf3-213ENST00000471978 SEC14L4Q9UDX3 406 aa19.67■□□□□ 0.74
C9orf3-213ENST00000471978 CHD3Q12873 2000 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms