RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 TXNDC15Q96J42 360 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 SOX7Q9BT81 388 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 NOX3Q9HBY0 568 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 NGBQ9NPG2 151 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 VAPAQ9P0L0 249 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 UPB1Q9UBR1 384 aa7.04□□□□□ -1.28
USP48-207ENST00000471752 SPIN1Q9Y657 262 aaPredicted RBP7.04□□□□□ -1.28
USP48-207ENST00000471752 HEATR1Q9H583 2144 aaKnown RBP7.04□□□□□ -1.28
USP48-207ENST00000471752 TRBV5-3A0A0A0MS03 114 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 A0A1B0GWA3 101 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 SLC35F4A4IF30 521 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 TRPC5OSA6NMA1 111 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 A8MVM7 634 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 FAM171A2A8MVW0 826 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 C3orf80F5H4A9 247 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 LYNX1G3V0Z9 82 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 MS4A18H0YCH9 400 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 CLIC1O00299 241 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 CD5LO43866 347 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 EIF1BO60739 113 aaKnown RBP7.03□□□□□ -1.28
USP48-207ENST00000471752 ZNF432O94892 652 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 KRT75O95678 551 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 THY1P04216 161 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 GPIP06744 558 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 ZCCHC18P0CG32 403 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 LYNX1P0DP58 116 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 PNMTP11086 282 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 IDO1P14902 403 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 PTAFRP25105 342 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 MPGP29372 298 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 HTR3AP46098 478 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 PPP2R2BQ00005 443 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 MS4A18Q3C1V0 323 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 TBRG1Q3YBR2 411 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 AGAP6Q5VW22 663 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 WBP2NLQ6ICG8 309 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 NIPAL3Q6P499 406 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 ANKRD16Q6P6B7 361 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 TMEM108Q6UXF1 575 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 DLEU7Q6UYE1 221 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 RBM45Q8IUH3 476 aaKnown RBP7.03□□□□□ -1.28
USP48-207ENST00000471752 HOMEZQ8IX15 550 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 PEX5LQ8IYB4 626 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 TRIML2Q8N7C3 387 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 GLB1L3Q8NCI6 653 aaPredicted RBP7.03□□□□□ -1.28
USP48-207ENST00000471752 OR4D11Q8NGI4 311 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 OR1K1Q8NGR3 316 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 PMM1Q92871 262 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 TMEM45BQ96B21 275 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 ZHX1-C8orf76Q96EF9 292 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 HS6ST2Q96MM7 605 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 SORCS2Q96PQ0 1159 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 ALKBH3Q96Q83 286 aaPredicted RBP7.03□□□□□ -1.28
USP48-207ENST00000471752 ZBTB18Q99592 522 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 NAA11Q9BSU3 229 aaPredicted RBP7.03□□□□□ -1.28
USP48-207ENST00000471752 EMC6Q9BV81 110 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 SPATA9Q9BWV2 254 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 CBLN4Q9NTU7 201 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 ZIM2Q9NZV7 527 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 DCTN4Q9UJW0 460 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 POU2F3Q9UKI9 436 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 ARFGEF3Q5TH69 2177 aa7.03□□□□□ -1.28
USP48-207ENST00000471752 MALRD1Q5VYJ5 2156 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 A0A0G2JPF8 293 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 TMEM129A0AVI4 362 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 HNRNPCL2B2RXH8 293 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 HNRNPCL3B7ZW38 293 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 M0R082 166 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 DNPH1O43598 174 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 HNRNPCL1O60812 293 aaKnown RBP7.02□□□□□ -1.29
USP48-207ENST00000471752 LYPD3O95274 346 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 ANP32DO95626 131 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 HNRNPCL4P0DMR1 293 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 NCF2P19878 526 aaPredicted RBP7.02□□□□□ -1.29
USP48-207ENST00000471752 FUT4P22083 530 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 AQP1P29972 269 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 GRPRP30550 384 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 RBMXP38159 391 aaKnown RBP7.02□□□□□ -1.29
USP48-207ENST00000471752 NUDT6P53370 316 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 CRISP3P54108 245 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 SLC18A1P54219 525 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 CLDN17P56750 224 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 DMTNQ08495 405 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 SF3A3Q12874 501 aaKnown RBP eCLIP7.02□□□□□ -1.29
USP48-207ENST00000471752 HNRNPA0Q13151 305 aaKnown RBP7.02□□□□□ -1.29
USP48-207ENST00000471752 RAB35Q15286 201 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 NPTX1Q15818 432 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 GSTA3Q16772 222 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 TMEM249Q2WGJ8 235 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 LIN52Q52LA3 116 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 RNF220Q5VTB9 566 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 CARD17Q5XLA6 110 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 TMEM225Q6GV28 225 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 OR7E24Q6IFN5 339 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 HMBOX1Q6NT76 420 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 BLOC1S3Q6QNY0 202 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 VHLLQ6RSH7 139 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 CXXC5Q7LFL8 322 aaKnown RBP7.02□□□□□ -1.29
USP48-207ENST00000471752 RETREG3Q86VR2 466 aa7.02□□□□□ -1.29
USP48-207ENST00000471752 FBXL14Q8N1E6 418 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms