RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 RNF212Q495C1 297 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 SPANXN4Q5MJ08 99 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 LDLRAP1Q5SW96 308 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 HENMT1Q5T8I9 393 aaKnown RBP4.19□□□□□ -1.74
CCDC39-202ENST00000471307 AGAP7PQ5VUJ5 663 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 ZNF470Q6ECI4 717 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 FAM151BQ6UXP7 276 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 TRIM69Q86WT6 500 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 HORMAD1Q86X24 394 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 CARM1Q86X55 608 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 PIANPQ8IYJ0 282 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 OTUD6BQ8N6M0 293 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 OR2T34Q8NGX1 318 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 ACMSDQ8TDX5 336 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 AP2M1Q96CW1 435 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 DTD2Q96FN9 168 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 CYYR1Q96J86 154 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 ATP6V1G3Q96LB4 118 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 VPS35Q96QK1 796 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 RBBP8Q99708 897 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 CCDC28BQ9BUN5 200 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 WRAP53Q9BUR4 548 aaKnown RBP4.19□□□□□ -1.74
CCDC39-202ENST00000471307 RIOK2Q9BVS4 552 aaKnown RBP4.19□□□□□ -1.74
CCDC39-202ENST00000471307 SPATA16Q9BXB7 569 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 CACNG6Q9BXT2 260 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 SLC17A9Q9BYT1 436 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 CENPHQ9H3R5 247 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 MOB1AQ9H8S9 216 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 UGT1A7Q9HAW7 530 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 UGT1A10Q9HAW8 530 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 UGT1A8Q9HAW9 530 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 SMOXQ9NWM0 555 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 PILRAQ9UKJ1 303 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 POMT2Q9UKY4 750 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 COLEC10Q9Y6Z7 277 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 TTC28Q96AY4 2481 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 TECTAO75443 2155 aa4.19□□□□□ -1.74
CCDC39-202ENST00000471307 SCN8AQ9UQD0 1980 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 ZNF106Q9H2Y7 1883 aaKnown RBP4.18□□□□□ -1.74
CCDC39-202ENST00000471307 IGLV3-16A0A075B6K0 115 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 SMIM30A4D0T7 59 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 C10orf142B7Z368 130 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 GPR89AB7ZAQ6 455 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 M0R296 226 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 CACNB4O00305 520 aaPredicted RBP4.18□□□□□ -1.74
CCDC39-202ENST00000471307 CCL22O00626 93 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 PRMT5O14744 637 aaPredicted RBP4.18□□□□□ -1.74
CCDC39-202ENST00000471307 INPP4BO15327 924 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 LATO43561 262 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 SSX5O60225 188 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 SLC25A14O95258 325 aaPredicted RBP4.18□□□□□ -1.74
CCDC39-202ENST00000471307 SEMA4FO95754 770 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 DCNP07585 359 aaKnown RBP4.18□□□□□ -1.74
CCDC39-202ENST00000471307 HOXC4P09017 264 aaPredicted RBP4.18□□□□□ -1.74
CCDC39-202ENST00000471307 GPR89BP0CG08 455 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 RALBP11234 206 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 RPS3P23396 243 aaKnown RBP eCLIP4.18□□□□□ -1.74
CCDC39-202ENST00000471307 CRABP2P29373 138 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 TRIM23P36406 574 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 SLC26A3P40879 764 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 FRKP42685 505 aaPredicted RBP4.18□□□□□ -1.74
CCDC39-202ENST00000471307 NSG1P42857 185 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 GPR1P46091 355 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 SERPINB8P50452 374 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 SLC18A1P54219 525 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 ATXN3P54252 364 aaPredicted RBP4.18□□□□□ -1.74
CCDC39-202ENST00000471307 MAGOHP61326 146 aaKnown RBP4.18□□□□□ -1.74
CCDC39-202ENST00000471307 TMED2Q15363 201 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 WSCD2Q2TBF2 565 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 C9orf66Q5T8R8 295 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 FAM45BPQ6NSW5 357 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 PNCKQ6P2M8 343 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 RFLNAQ6ZTI6 216 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 GPR141Q7Z602 305 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 SERPINA9Q86WD7 417 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 CACUL1Q86Y37 369 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 SIAH3Q8IW03 269 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 ARFGAP2Q8N6H7 521 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 ZBTB44Q8NCP5 570 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 DENND6BQ8NEG7 585 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 FAM45AQ8TCE6 357 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 GLYATL1Q969I3 302 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 TLCD1Q96CP7 247 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 NUS1Q96E22 293 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 DCUN1D1Q96GG9 259 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 ZNF514Q96K75 400 aaPredicted RBP4.18□□□□□ -1.74
CCDC39-202ENST00000471307 BIRC8Q96P09 236 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 COPS8Q99627 209 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 GPR22Q99680 433 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 STRADBQ9C0K7 418 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 FAM96AQ9H5X1 160 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 RNPEPL1Q9HAU8 725 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 POPDC3Q9HBV1 291 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 FBXO6Q9NRD1 293 aaPredicted RBP4.18□□□□□ -1.74
CCDC39-202ENST00000471307 TAS2R13Q9NYV9 303 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 DCDC2Q9UHG0 476 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 CD84Q9UIB8 345 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 CRLS1Q9UJA2 301 aa4.18□□□□□ -1.74
CCDC39-202ENST00000471307 RPH3AQ9Y2J0 694 aaPredicted RBP4.18□□□□□ -1.74
CCDC39-202ENST00000471307 ZDBF2Q9HCK1 2354 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms