RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 KCTD21Q4G0X4 260 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 MTX3Q5HYI7 312 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 ADAM5Q6NVV9 412 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 BLOC1S3Q6QNY0 202 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 P2RY8Q86VZ1 359 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 FUNDC1Q8IVP5 155 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 ZNF611Q8N823 705 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 PIGXQ8TBF5 258 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 CNOT9Q92600 299 aaKnown RBP11.96□□□□□ -0.49
HMGN1-211ENST00000471260 DDIT4LQ96D03 193 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 C9orf16Q9BUW7 83 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 POTEKPQ9BYX7 375 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 ESRP2Q9H6T0 727 aaKnown RBP11.96□□□□□ -0.49
HMGN1-211ENST00000471260 AP3M1Q9Y2T2 418 aa11.96□□□□□ -0.49
HMGN1-211ENST00000471260 ROS1P08922 2347 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 DSPPQ9NZW4 1301 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 DHRS12A0PJE2 317 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 TMEM247A6NEH6 219 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 CLDN24A6NM45 220 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 FXYD1O00168 92 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 NR5A2O00482 541 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 HS3ST1O14792 307 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 ADAM11O75078 769 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 C1QCP02747 245 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 COX5AP20674 150 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 SLC1A3P43003 542 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 POLR2JP52435 117 aaKnown RBP11.95□□□□□ -0.5
HMGN1-211ENST00000471260 MVDP53602 400 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 SLC16A1P53985 500 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 CRISP3P54108 245 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 TAB1Q15750 504 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 Q5PR19 223 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 COX20Q5RI15 118 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 NCMAPQ5T1S8 102 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 MRPL2Q5T653 305 aaKnown RBP11.95□□□□□ -0.5
HMGN1-211ENST00000471260 BHLHA15Q7RTS1 189 aaPredicted RBP11.95□□□□□ -0.5
HMGN1-211ENST00000471260 ZNF100Q8IYN0 542 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 TMEM171Q8WVE6 324 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 IGFBPL1Q8WX77 278 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 ARL5BQ96KC2 179 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 ZNF300Q96RE9 604 aaPredicted RBP11.95□□□□□ -0.5
HMGN1-211ENST00000471260 RBM38Q9H0Z9 239 aaKnown RBP11.95□□□□□ -0.5
HMGN1-211ENST00000471260 ARMC7Q9H6L4 198 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 TPT1P8Q9HAU6 139 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 SNX13Q9Y5W8 968 aa11.95□□□□□ -0.5
HMGN1-211ENST00000471260 TMED7-TICAM2A0A0A6YYA0 188 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 A0A0G2JPF8 293 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 FAM234BA2RU67 622 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 CDHR4A6H8M9 788 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 HNRNPCL2B2RXH8 293 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 HNRNPCL3B7ZW38 293 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 ZNF701M0R085 212 aaPredicted RBP11.94□□□□□ -0.5
HMGN1-211ENST00000471260 NME4O00746 187 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 TFAP2AP05549 437 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 CD3EP07766 207 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 INHBBP09529 407 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 TFPTP0C1Z6 253 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 HNRNPCL4P0DMR1 293 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 ZNF23P17027 643 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 CRATP43155 626 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 DSTNP60981 165 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 SLC35A1P78382 337 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 H3F3AP84243 136 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 MYBPC1Q00872 1141 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 EPS8Q12929 822 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 TIMM23BQ5SRD1 257 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 DPP10Q8N608 796 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 PAPD5Q8NDF8 572 aaKnown RBP11.94□□□□□ -0.5
HMGN1-211ENST00000471260 PNPT1Q8TCS8 783 aaKnown RBP11.94□□□□□ -0.5
HMGN1-211ENST00000471260 MUCL1Q96DR8 90 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 NAA11Q9BSU3 229 aaPredicted RBP11.94□□□□□ -0.5
HMGN1-211ENST00000471260 BDH2Q9BUT1 245 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 ADAM19Q9H013 955 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 RAD21L1Q9H4I0 556 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 CACYBPQ9HB71 228 aaKnown RBP11.94□□□□□ -0.5
HMGN1-211ENST00000471260 PRSS50Q9UI38 385 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 OSGIN1Q9UJX0 560 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 ZNF232Q9UNY5 417 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 NOSIPQ9Y314 301 aaKnown RBP11.94□□□□□ -0.5
HMGN1-211ENST00000471260 TMED7Q9Y3B3 224 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 RNF115Q9Y4L5 304 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 PRR14LQ5THK1 2151 aa11.94□□□□□ -0.5
HMGN1-211ENST00000471260 SETD2Q9BYW2 2564 aaPredicted RBP11.93□□□□□ -0.5
HMGN1-211ENST00000471260 TRIM64CA6NLI5 447 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 ZNF716A6NP11 495 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 PGM3O95394 542 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 PLAUP00749 431 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 THBS1P07996 1170 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 ETFAP13804 333 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 GGT1P19440 569 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 ATP6V1B2P21281 511 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 FASP25445 335 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 TACR3P29371 465 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 PTH2RP49190 550 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 COPZ1P61923 177 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 FADDQ13158 208 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 LARS2Q15031 903 aaKnown RBP11.93□□□□□ -0.5
HMGN1-211ENST00000471260 TSC22D1Q15714 1073 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 MAPK11Q15759 364 aa11.93□□□□□ -0.5
HMGN1-211ENST00000471260 C1QTNF12Q5T7M4 302 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms