RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 SLC13A4Q9UKG4 626 aa5.12□□□□□ -1.59
VARS-222ENST00000470953 TRIM33Q9UPN9 1127 aa5.12□□□□□ -1.59
VARS-222ENST00000470953 USP22Q9UPT9 525 aa5.12□□□□□ -1.59
VARS-222ENST00000470953 GPR45Q9Y5Y3 372 aa5.12□□□□□ -1.59
VARS-222ENST00000470953 KCNE3Q9Y6H6 103 aa5.12□□□□□ -1.59
VARS-222ENST00000470953 PCNX3Q9H6A9 2034 aa5.12□□□□□ -1.59
VARS-222ENST00000470953 WNK2Q9Y3S1 2297 aa5.12□□□□□ -1.59
VARS-222ENST00000470953 A0A0G2JND7 137 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 SLC22A31A6NKX4 558 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 HMGN4O00479 90 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 ZNF195O14628 629 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 ABCD4O14678 606 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 ANKRD28O15084 1053 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 ANGPT2O15123 496 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 LILRA1O75019 489 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 TGDSO95455 350 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 FESP07332 822 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 CSF3P09919 207 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 LINGO3P0C6S8 592 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 TROVE2P10155 538 aaKnown RBP eCLIP5.11□□□□□ -1.59
VARS-222ENST00000470953 PRKCAP17252 672 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 NCF2P19878 526 aaPredicted RBP5.11□□□□□ -1.59
VARS-222ENST00000470953 CCNA2P20248 432 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 CDKN2CP42773 168 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 CRISP3P54108 245 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 CARD18P57730 90 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 COPZ1P61923 177 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 CSNK2A1P68400 391 aaPredicted RBP5.11□□□□□ -1.59
VARS-222ENST00000470953 SKP2Q13309 424 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 LARS2Q15031 903 aaKnown RBP5.11□□□□□ -1.59
VARS-222ENST00000470953 RNPS1Q15287 305 aaKnown RBP5.11□□□□□ -1.59
VARS-222ENST00000470953 ZNF141Q15928 474 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 TMEM176BQ3YBM2 270 aaPredicted RBP5.11□□□□□ -1.59
VARS-222ENST00000470953 LIN52Q52LA3 116 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 KLHL26Q53HC5 615 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 DMRTC1Q5HYR2 192 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 EXOSC6Q5RKV6 272 aaKnown RBP5.11□□□□□ -1.59
VARS-222ENST00000470953 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.11□□□□□ -1.59
VARS-222ENST00000470953 TYW3Q6IPR3 259 aaKnown RBP5.11□□□□□ -1.59
VARS-222ENST00000470953 CBLN3Q6UW01 205 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 FRRS1Q6ZNA5 592 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 CCDC80Q76M96 950 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 OLIG3Q7RTU3 272 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 MAVSQ7Z434 540 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 GGNQ86UU5 652 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 ANKS4BQ8N8V4 417 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 ANKFN1Q8N957 763 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 LINC01356Q8N9X3 169 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 OR6K3Q8NGY3 331 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 SLC25A43Q8WUT9 341 aaPredicted RBP5.11□□□□□ -1.59
VARS-222ENST00000470953 WFDC12Q8WWY7 111 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 OIT3Q8WWZ8 545 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 ST8SIA1Q92185 356 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 OSTF1Q92882 214 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 VPS33AQ96AX1 596 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 AURKBQ96GD4 344 aaPredicted RBP5.11□□□□□ -1.59
VARS-222ENST00000470953 GMPPAQ96IJ6 420 aaPredicted RBP5.11□□□□□ -1.59
VARS-222ENST00000470953 TEX37Q96LM6 180 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 SORCS2Q96PQ0 1159 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 DUX5Q96PT3 197 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 TRNT1Q96Q11 434 aaKnown RBP5.11□□□□□ -1.59
VARS-222ENST00000470953 SNX18Q96RF0 628 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 RSPO3Q9BXY4 272 aaPredicted RBP5.11□□□□□ -1.59
VARS-222ENST00000470953 LAT2Q9GZY6 243 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 QRSL1Q9H0R6 528 aaKnown RBP5.11□□□□□ -1.59
VARS-222ENST00000470953 OR10A4Q9H209 315 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 NPHS2Q9NP85 383 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 SLCO1B3Q9NPD5 702 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 SDR39U1Q9NRG7 319 aaPredicted RBP5.11□□□□□ -1.59
VARS-222ENST00000470953 GLRX2Q9NS18 164 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 THUMPD1Q9NXG2 353 aaKnown RBP5.11□□□□□ -1.59
VARS-222ENST00000470953 CCDC167Q9P0B6 97 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 EMC3Q9P0I2 261 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 DCTN4Q9UJW0 460 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 CORO2BQ9UQ03 480 aa5.11□□□□□ -1.59
VARS-222ENST00000470953 A0A0J9YW62 118 aa5.1□□□□□ -1.59
VARS-222ENST00000470953 CENPVL1A0A0U1RR11 272 aa5.1□□□□□ -1.59
VARS-222ENST00000470953 A0A1W2PNR3 127 aa5.1□□□□□ -1.59
VARS-222ENST00000470953 ERICH4A6NGS2 130 aa5.1□□□□□ -1.59
VARS-222ENST00000470953 EVPLLA8MZ36 301 aa5.1□□□□□ -1.59
VARS-222ENST00000470953 NPIPB9F8W1W9 429 aa5.1□□□□□ -1.59
VARS-222ENST00000470953 SULT2B1O00204 365 aa5.1□□□□□ -1.59
VARS-222ENST00000470953 NDUFS8O00217 210 aa5.1□□□□□ -1.59
VARS-222ENST00000470953 TIMM23O14925 209 aa5.1□□□□□ -1.59
VARS-222ENST00000470953 OIP5O43482 229 aa5.1□□□□□ -1.59
VARS-222ENST00000470953 FCMRO60667 390 aa5.1□□□□□ -1.59
VARS-222ENST00000470953 E2F6O75461 281 aa5.1□□□□□ -1.59
VARS-222ENST00000470953 UGT2B17O75795 530 aa5.1□□□□□ -1.59
VARS-222ENST00000470953 DBIP07108 87 aaKnown RBP5.1□□□□□ -1.59
VARS-222ENST00000470953 CHRM4P08173 479 aa5.1□□□□□ -1.59
VARS-222ENST00000470953 VIMP08670 466 aaKnown RBP5.1□□□□□ -1.59
VARS-222ENST00000470953 ETFAP13804 333 aa5.1□□□□□ -1.59
VARS-222ENST00000470953 H2AFXP16104 143 aaPredicted RBP5.1□□□□□ -1.59
VARS-222ENST00000470953 ENPP1P22413 925 aa5.1□□□□□ -1.59
VARS-222ENST00000470953 PPIBP23284 216 aaKnown RBP5.1□□□□□ -1.59
VARS-222ENST00000470953 IL32P24001 234 aa5.1□□□□□ -1.59
VARS-222ENST00000470953 APEX1P27695 318 aaKnown RBP5.1□□□□□ -1.59
VARS-222ENST00000470953 GTF2E2P29084 291 aaKnown RBP5.1□□□□□ -1.59
VARS-222ENST00000470953 IL12AP29459 219 aa5.1□□□□□ -1.59
VARS-222ENST00000470953 HTR3AP46098 478 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms