RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 BEND3Q5T5X7 828 aa3.14□□□□□ -1.91
SSB-209ENST00000470621 TTC23Q5W5X9 447 aa3.14□□□□□ -1.91
SSB-209ENST00000470621 CCDC80Q76M96 950 aa3.14□□□□□ -1.91
SSB-209ENST00000470621 SYT14Q8NB59 555 aa3.14□□□□□ -1.91
SSB-209ENST00000470621 OR2T34Q8NGX1 318 aa3.14□□□□□ -1.91
SSB-209ENST00000470621 TGM7Q96PF1 710 aa3.14□□□□□ -1.91
SSB-209ENST00000470621 RNF2Q99496 336 aa3.14□□□□□ -1.91
SSB-209ENST00000470621 ACTR6Q9GZN1 396 aa3.14□□□□□ -1.91
SSB-209ENST00000470621 CDC42EP4Q9H3Q1 356 aaKnown RBP3.14□□□□□ -1.91
SSB-209ENST00000470621 TPK1Q9H3S4 243 aa3.14□□□□□ -1.91
SSB-209ENST00000470621 NECAP2Q9NVZ3 263 aa3.14□□□□□ -1.91
SSB-209ENST00000470621 ZNF282Q9UDV7 671 aaPredicted RBP3.14□□□□□ -1.91
SSB-209ENST00000470621 COPS3Q9UNS2 423 aa3.14□□□□□ -1.91
SSB-209ENST00000470621 RPL36Q9Y3U8 105 aaKnown RBP3.14□□□□□ -1.91
SSB-209ENST00000470621 SLC25A15Q9Y619 301 aa3.14□□□□□ -1.91
SSB-209ENST00000470621 LRCOL1A6NCL2 159 aa3.13□□□□□ -1.91
SSB-209ENST00000470621 F5H6K3 240 aa3.13□□□□□ -1.91
SSB-209ENST00000470621 KLK3P07288 261 aaPredicted RBP3.13□□□□□ -1.91
SSB-209ENST00000470621 PLEKP08567 350 aaPredicted RBP3.13□□□□□ -1.91
SSB-209ENST00000470621 TDGF1P13385 188 aa3.13□□□□□ -1.91
SSB-209ENST00000470621 HMGB2P26583 209 aaKnown RBP3.13□□□□□ -1.91
SSB-209ENST00000470621 NMUP48645 174 aa3.13□□□□□ -1.91
SSB-209ENST00000470621 ARRB1P49407 418 aaPredicted RBP3.13□□□□□ -1.91
SSB-209ENST00000470621 TDGF1P3P51864 188 aa3.13□□□□□ -1.91
SSB-209ENST00000470621 KLRC3Q07444 240 aa3.13□□□□□ -1.91
SSB-209ENST00000470621 PDK4Q16654 411 aa3.13□□□□□ -1.91
SSB-209ENST00000470621 RSPO1Q2MKA7 263 aaPredicted RBP3.13□□□□□ -1.91
SSB-209ENST00000470621 FRMPD2BQ6IN97 320 aa3.13□□□□□ -1.91
SSB-209ENST00000470621 CES3Q6UWW8 571 aa3.13□□□□□ -1.91
SSB-209ENST00000470621 SAXO1Q8IYX7 474 aa3.13□□□□□ -1.91
SSB-209ENST00000470621 ANKFN1Q8N957 763 aa3.13□□□□□ -1.91
SSB-209ENST00000470621 TMEM246Q9BRR3 403 aa3.13□□□□□ -1.91
SSB-209ENST00000470621 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.13□□□□□ -1.91
SSB-209ENST00000470621 THUMPD1Q9NXG2 353 aaKnown RBP3.13□□□□□ -1.91
SSB-209ENST00000470621 PIPOXQ9P0Z9 390 aa3.13□□□□□ -1.91
SSB-209ENST00000470621 POLDIP2Q9Y2S7 368 aa3.13□□□□□ -1.91
SSB-209ENST00000470621 TIMM10BQ9Y5J6 103 aa3.13□□□□□ -1.91
SSB-209ENST00000470621 PIKFYVEQ9Y2I7 2098 aa3.13□□□□□ -1.91
SSB-209ENST00000470621 TET2Q6N021 2002 aaPredicted RBP3.12□□□□□ -1.91
SSB-209ENST00000470621 PTCH1Q13635 1447 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 SPRR5A0A1B0GTR4 108 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 LOC110117498-PIK3R3F6TDL0 507 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 SS18L1O75177 396 aaPredicted RBP3.12□□□□□ -1.91
SSB-209ENST00000470621 ATP5LO75964 103 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 AP2A1O95782 977 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 UGT2B4P06133 528 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 IQCF3P0C7M6 154 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 CHI3L1P36222 383 aaPredicted RBP3.12□□□□□ -1.91
SSB-209ENST00000470621 LONP1P36776 959 aaKnown RBP3.12□□□□□ -1.91
SSB-209ENST00000470621 DDOSTP39656 456 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 ACAA2P42765 397 aaKnown RBP3.12□□□□□ -1.91
SSB-209ENST00000470621 QARSP47897 775 aaKnown RBP3.12□□□□□ -1.91
SSB-209ENST00000470621 CASP4P49662 377 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 GPM6AP51674 278 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 CBX1P83916 185 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 ELP6Q0PNE2 266 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 SLAQ13239 276 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 VGLL4Q14135 290 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 MICBQ29980 383 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 NADK2Q4G0N4 442 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 LRRC10Q5BKY1 277 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 MARCH8Q5T0T0 291 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 C6orf120Q7Z4R8 191 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 CAMK2N1Q7Z7J9 78 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 C12orf56Q8IXR9 622 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 ZNF596Q8TC21 504 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 DTX3LQ8TDB6 740 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 OXGR1Q96P68 337 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 TUBGCP2Q9BSJ2 902 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 RAB33BQ9H082 229 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 LRRN3Q9H3W5 708 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 CLMPQ9H6B4 373 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 REEP4Q9H6H4 257 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 ZFP14Q9HCL3 533 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 RNF14Q9UBS8 474 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 RPH3ALQ9UNE2 315 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 PCM1Q15154 2024 aa3.12□□□□□ -1.91
SSB-209ENST00000470621 METTL21EPA6NDL7 271 aa3.11□□□□□ -1.91
SSB-209ENST00000470621 C12orf77C9JDV5 145 aa3.11□□□□□ -1.91
SSB-209ENST00000470621 CD5LO43866 347 aa3.11□□□□□ -1.91
SSB-209ENST00000470621 DIRAS1O95057 198 aa3.11□□□□□ -1.91
SSB-209ENST00000470621 TSPY4P0CV99 314 aa3.11□□□□□ -1.91
SSB-209ENST00000470621 TSPY10P0CW01 314 aa3.11□□□□□ -1.91
SSB-209ENST00000470621 RPA2P15927 270 aa3.11□□□□□ -1.91
SSB-209ENST00000470621 HNRNPA2B1P22626 353 aaKnown RBP3.11□□□□□ -1.91
SSB-209ENST00000470621 RDXP35241 583 aaKnown RBP3.11□□□□□ -1.91
SSB-209ENST00000470621 KRTAP10-10P60014 251 aa3.11□□□□□ -1.91
SSB-209ENST00000470621 ACVR1Q04771 509 aa3.11□□□□□ -1.91
SSB-209ENST00000470621 CYTH1Q15438 398 aa3.11□□□□□ -1.91
SSB-209ENST00000470621 C1orf220Q5T0J3 134 aa3.11□□□□□ -1.91
SSB-209ENST00000470621 C1orf94Q6P1W5 598 aa3.11□□□□□ -1.91
SSB-209ENST00000470621 HSDL2Q6YN16 418 aa3.11□□□□□ -1.91
SSB-209ENST00000470621 ZNF546Q86UE3 836 aa3.11□□□□□ -1.91
SSB-209ENST00000470621 CCDC65Q8IXS2 484 aa3.11□□□□□ -1.91
SSB-209ENST00000470621 ZNF683Q8IZ20 524 aa3.11□□□□□ -1.91
SSB-209ENST00000470621 H1FOOQ8IZA3 346 aaPredicted RBP3.11□□□□□ -1.91
SSB-209ENST00000470621 STARD8Q92502 1023 aa3.11□□□□□ -1.91
SSB-209ENST00000470621 C16orf45Q96MC5 204 aaPredicted RBP3.11□□□□□ -1.91
SSB-209ENST00000470621 UFSP2Q9NUQ7 469 aa3.11□□□□□ -1.91
SSB-209ENST00000470621 TMOD2Q9NZR1 351 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms