RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 KLHL13Q9P2N7 655 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 CORINQ9Y5Q5 1042 aa13.33□□□□□ -0.28
CDC42SE1-203ENST00000470278 IGKV3D-15A0A087WSY6 115 aa13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 A0A1W2PNV4 684 aa13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 DHRS12A0PJE2 317 aa13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 AQP7P3A6NL99 342 aa13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 TNFSF13O75888 250 aa13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 MT-ND1P03886 318 aa13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 H1F0P07305 194 aaKnown RBP13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 RAP2AP10114 183 aa13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 CTSSP25774 331 aa13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 OPRM1P35372 400 aa13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 SLC16A1P53985 500 aa13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 UGT2B15P54855 530 aa13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 CHRNB3Q05901 458 aa13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 ZNF74Q16587 644 aa13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 PPP4R4Q6NUP7 873 aa13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 MRGPRGQ86SM5 289 aa13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 LSRQ86X29 649 aaPredicted RBP13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 GCNT2Q8N0V5 402 aa13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 SCAIQ8N9R8 606 aa13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 ACOT11Q8WXI4 607 aaPredicted RBP13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 ROBO4Q8WZ75 1007 aa13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 SEPHS2Q99611 448 aa13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 PSD2Q9BQI7 771 aa13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 NAA11Q9BSU3 229 aaPredicted RBP13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 MEPEQ9NQ76 525 aaPredicted RBP13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 ING1Q9UK53 422 aaPredicted RBP13.32□□□□□ -0.28
CDC42SE1-203ENST00000470278 INTS1Q8N201 2190 aaKnown RBP13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 IGHV3-15A0A0B4J1V0 119 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 ENO4A6NNW6 628 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 ZNF716A6NP11 495 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 ZNF724A8MTY0 619 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 ZNF814B7Z6K7 855 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 DVL2O14641 736 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 VAMP5O95183 116 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 BGLAPP02818 100 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 KLK2P20151 261 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 GRNP28799 593 aaKnown RBP13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 GTF2E2P29084 291 aaKnown RBP13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 P2RY4P51582 365 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 SMIM11AP58511 58 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 FOXF2Q12947 444 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 POU4F3Q15319 338 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 SLC25A35Q3KQZ1 300 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 OTUD3Q5T2D3 398 aaPredicted RBP13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 C1orf146Q5VVC0 180 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 FAM214BQ7L5A3 538 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 SPATA24Q86W54 205 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 P3H2Q8IVL5 708 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 RNF113BQ8IZP6 322 aaKnown RBP13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 SLC7A13Q8TCU3 470 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 LIPHQ8WWY8 451 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 SDCCAG3Q96C92 435 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 INTS12Q96CB8 462 aaKnown RBP13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 DNAJA3Q96EY1 480 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 FUZQ9BT04 418 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 SF3B5Q9BWJ5 86 aaKnown RBP13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 FKRPQ9H9S5 495 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 RHCGQ9UBD6 479 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 B3GALT5Q9Y2C3 310 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 EMC9Q9Y3B6 208 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 MED31Q9Y3C7 131 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 MED13LQ71F56 2210 aa13.31□□□□□ -0.28
CDC42SE1-203ENST00000470278 CIB2O75838 187 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 DIRAS1O95057 198 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 AKR7A3O95154 331 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 PLGP00747 810 aaPredicted RBP13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 PTNP21246 168 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 FUT4P22083 530 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 AGTR1P30556 359 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 KIR2DL2P43627 348 aaPredicted RBP13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 CTBP2P56545 445 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 LTBQ06643 244 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 RASGEF1BQ0VAM2 473 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 GK3PQ14409 553 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 MBOAT2Q6ZWT7 520 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 CCDC71Q8IV32 467 aaPredicted RBP13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 MCEMP1Q8IX19 187 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 PAPD5Q8NDF8 572 aaKnown RBP13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 OR6K3Q8NGY3 331 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 LILRB4Q8NHJ6 448 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 PFN4Q8NHR9 129 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 CANT1Q8WVQ1 401 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 MARVELD3Q96A59 401 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 MOGAT1Q96PD6 335 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 PIGMQ9H3S5 423 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 FANCFQ9NPI8 374 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 MRPL39Q9NYK5 338 aaKnown RBP13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 EMC3Q9P0I2 261 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 ZNF229Q9UJW7 825 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 RASD1Q9Y272 281 aa13.3□□□□□ -0.28
CDC42SE1-203ENST00000470278 A0A087WUU8 490 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 LOC102725191A0A1B0GVB3 256 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 M0R082 166 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 KPNA4O00629 521 aaPredicted RBP13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 GPR171O14626 319 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 RAMP1O60894 148 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 KRT36O76013 467 aa13.29□□□□□ -0.28
CDC42SE1-203ENST00000470278 GADD45GO95257 159 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms