RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 ELOA3Q8NG57 546 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 AKAP1Q92667 903 aaKnown RBP eCLIP12.37□□□□□ -0.43
COMMD3-208ENST00000470045 SLC38A4Q969I6 547 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 MUCL1Q96DR8 90 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 KTI12Q96EK9 354 aaPredicted RBP12.37□□□□□ -0.43
COMMD3-208ENST00000470045 BOD1Q96IK1 185 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 WFDC6Q9BQY6 131 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 SLCO5A1Q9H2Y9 848 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 ZNF701Q9NV72 531 aaPredicted RBP12.37□□□□□ -0.43
COMMD3-208ENST00000470045 RPS6KB2Q9UBS0 482 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 RASD1Q9Y272 281 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 SLC25A15Q9Y619 301 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 SETD2Q9BYW2 2564 aaPredicted RBP12.37□□□□□ -0.43
COMMD3-208ENST00000470045 VPS13CQ709C8 3753 aa12.37□□□□□ -0.43
COMMD3-208ENST00000470045 A0A0B4J2E0 115 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 A0A1B0GX12 115 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 CIB4A0PJX0 185 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 ARHGEF9O43307 516 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 FMO6PO60774 539 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 C8BP07358 591 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 DANCRP0C864 163 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 PCGF2P35227 344 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 RPS5P46782 204 aaKnown RBP12.36□□□□□ -0.43
COMMD3-208ENST00000470045 ARFIP2P53365 341 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 NRF1Q16656 503 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 ZNF672Q499Z4 452 aaPredicted RBP12.36□□□□□ -0.43
COMMD3-208ENST00000470045 ALG10BQ5I7T1 473 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 SWT1Q5T5J6 900 aaKnown RBP12.36□□□□□ -0.43
COMMD3-208ENST00000470045 FAM69AQ5T7M9 428 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 TMEM225Q6GV28 225 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 OR7E24Q6IFN5 339 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 CREB3L2Q70SY1 520 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 AAED1Q7RTV5 226 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 EPHX4Q8IUS5 362 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 POMGNT2Q8NAT1 580 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 KBTBD8Q8NFY9 601 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 GPR32P1Q8NGA4 272 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 OR6S1Q8NH40 331 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 FBXW5Q969U6 566 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 ARHGDIGQ99819 225 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 PRR14Q9BWN1 585 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 SAR1AQ9NR31 198 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 B3GAT1Q9P2W7 334 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 PLCE1Q9P212 2302 aa12.36□□□□□ -0.43
COMMD3-208ENST00000470045 A0A087WUJ7 227 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 CCT8L1PA6NM43 557 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 BBIP1A8MTZ0 92 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 SHISA9B4DS77 424 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 M0QX08 132 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 CLOCKO15516 846 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 OR2T1O43869 369 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 LGI1O95970 557 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 MPGP29372 298 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 PTH2RP49190 550 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 CRYBA2P53672 197 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 NCALDP61601 193 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 GUCY1A3Q02108 690 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 KLF10Q13118 480 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 OR1Q1Q15612 314 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 DUSP7Q16829 419 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 NANOGP8Q6NSW7 305 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 PATL1Q86TB9 770 aaKnown RBP12.35□□□□□ -0.43
COMMD3-208ENST00000470045 GPAT4Q86UL3 456 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 RANBP3LQ86VV4 465 aaPredicted RBP12.35□□□□□ -0.43
COMMD3-208ENST00000470045 CALHM3Q86XJ0 350 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 P3H2Q8IVL5 708 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 WDR31Q8NA23 367 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 SMYD1Q8NB12 490 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 ADPRHL1Q8NDY3 354 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 TMEM171Q8WVE6 324 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 NEUROG1Q92886 237 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 TAAR8Q969N4 342 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 SLC47A1Q96FL8 570 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 NANOGQ9H9S0 305 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 MED4Q9NPJ6 270 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 SLC17A5Q9NRA2 495 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 KLHL14Q9P2G3 628 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 UPB1Q9UBR1 384 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 SEC14L4Q9UDX3 406 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 RCE1Q9Y256 329 aa12.35□□□□□ -0.43
COMMD3-208ENST00000470045 TRAV36DV7A0A075B6V5 113 aa12.34□□□□□ -0.43
COMMD3-208ENST00000470045 LOC102725191A0A1B0GVB3 256 aa12.34□□□□□ -0.43
COMMD3-208ENST00000470045 OVOL3O00110 214 aa12.34□□□□□ -0.43
COMMD3-208ENST00000470045 ZNF432O94892 652 aa12.34□□□□□ -0.43
COMMD3-208ENST00000470045 NPPAP01160 153 aa12.34□□□□□ -0.43
COMMD3-208ENST00000470045 OPN1SWP03999 348 aa12.34□□□□□ -0.43
COMMD3-208ENST00000470045 VIMP08670 466 aaKnown RBP12.34□□□□□ -0.43
COMMD3-208ENST00000470045 CD247P20963 164 aa12.34□□□□□ -0.43
COMMD3-208ENST00000470045 SELENOPP49908 381 aa12.34□□□□□ -0.43
COMMD3-208ENST00000470045 SLC25A3Q00325 362 aa12.34□□□□□ -0.43
COMMD3-208ENST00000470045 TGFBR3Q03167 851 aa12.34□□□□□ -0.43
COMMD3-208ENST00000470045 CYLC2Q14093 348 aaPredicted RBP12.34□□□□□ -0.43
COMMD3-208ENST00000470045 NPTX1Q15818 432 aa12.34□□□□□ -0.43
COMMD3-208ENST00000470045 VMACQ2NL98 169 aa12.34□□□□□ -0.43
COMMD3-208ENST00000470045 RABL3Q5HYI8 236 aa12.34□□□□□ -0.43
COMMD3-208ENST00000470045 REP15Q6BDI9 236 aa12.34□□□□□ -0.43
COMMD3-208ENST00000470045 LINC00114Q6XXX2 140 aa12.34□□□□□ -0.43
COMMD3-208ENST00000470045 CCDC80Q76M96 950 aa12.34□□□□□ -0.43
COMMD3-208ENST00000470045 OR8J3Q8NGG0 315 aa12.34□□□□□ -0.43
COMMD3-208ENST00000470045 OR52N5Q8NH56 324 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms