RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 GPR137Q96N19 417 aa5.63□□□□□ -1.51
PTCD3-208ENST00000469585 ZNF681Q96N22 645 aa5.63□□□□□ -1.51
PTCD3-208ENST00000469585 STACQ99469 402 aa5.63□□□□□ -1.51
PTCD3-208ENST00000469585 SORT1Q99523 831 aa5.63□□□□□ -1.51
PTCD3-208ENST00000469585 TTTY12Q9BZ98 90 aa5.63□□□□□ -1.51
PTCD3-208ENST00000469585 NXF5Q9H1B4 397 aaKnown RBP5.63□□□□□ -1.51
PTCD3-208ENST00000469585 AIG1Q9NVV5 245 aa5.63□□□□□ -1.51
PTCD3-208ENST00000469585 HSPB7Q9UBY9 170 aa5.63□□□□□ -1.51
PTCD3-208ENST00000469585 CCL27Q9Y4X3 112 aa5.63□□□□□ -1.51
PTCD3-208ENST00000469585 CROCCQ5TZA2 2017 aa5.63□□□□□ -1.51
PTCD3-208ENST00000469585 TNRC6AQ8NDV7 1962 aaKnown RBP5.62□□□□□ -1.51
PTCD3-208ENST00000469585 ASPDHA6ND91 283 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 GJE1A6NN92 205 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 G3V3Y1 287 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 UPK1AO00322 258 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 CCL21O00585 134 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 SDHDO14521 159 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 TO15178 435 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 SCO2O43819 266 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 PRKNO60260 465 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-208ENST00000469585 HCN1O60741 890 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 SLC19A2O60779 497 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 STX11O75558 287 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 PDE9AO76083 593 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 HMGN2P05204 90 aaKnown RBP5.62□□□□□ -1.51
PTCD3-208ENST00000469585 CT62P0C5K7 136 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 CCL3P10147 92 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 LAMP1P11279 417 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 GNLYP22749 145 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 EVI2BP34910 448 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 PTGER4P35408 488 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 PIGAP37287 484 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 DNASE1L1P49184 302 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 EMDP50402 254 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 EFNA3P52797 238 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 DIO3P55073 304 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 C17orf67Q0P5P2 114 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 LASP1Q14847 261 aaKnown RBP5.62□□□□□ -1.51
PTCD3-208ENST00000469585 ZNF791Q3KP31 576 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-208ENST00000469585 GPAT3Q53EU6 434 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 PDSS1Q5T2R2 415 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 METTL21CQ5VZV1 264 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 OR4F3Q6IEY1 312 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 CDC73Q6P1J9 531 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 IFNEQ86WN2 208 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 KRTCAP2Q8N6L1 136 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 NRACQ8N912 160 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 ZFP62Q8NB50 900 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-208ENST00000469585 GOT1L1Q8NHS2 421 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-208ENST00000469585 SSC4DQ8WTU2 575 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 OIT3Q8WWZ8 545 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 ADIPOR1Q96A54 375 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 EFHD2Q96C19 240 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-208ENST00000469585 VSTM2LQ96N03 204 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 NR1H4Q96RI1 486 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-208ENST00000469585 SH3GL1Q99961 368 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 PIGQQ9BRB3 760 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 SLC35A5Q9BS91 424 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 LMF2Q9BU23 707 aaKnown RBP5.62□□□□□ -1.51
PTCD3-208ENST00000469585 WDR55Q9H6Y2 383 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-208ENST00000469585 FANCFQ9NPI8 374 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 POLE3Q9NRF9 147 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 UBQLN4Q9NRR5 601 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 GIN1Q9NXP7 522 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 ELOVL5Q9NYP7 299 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 ZNF639Q9UID6 485 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 BTNL2Q9UIR0 455 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 SH3BGRL2Q9UJC5 107 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 ZNF223Q9UK11 482 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-208ENST00000469585 LIPT1Q9Y234 373 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 PCDHGB5Q9Y5G0 923 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 CSAG2Q9Y5P2 127 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 WIF1Q9Y5W5 379 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 ASPMQ8IZT6 3477 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 MED13Q9UHV7 2174 aa5.62□□□□□ -1.51
PTCD3-208ENST00000469585 PIEZO2Q9H5I5 2752 aa5.61□□□□□ -1.51
PTCD3-208ENST00000469585 NR5A2O00482 541 aa5.61□□□□□ -1.51
PTCD3-208ENST00000469585 SOCS2O14508 198 aa5.61□□□□□ -1.51
PTCD3-208ENST00000469585 CCDC22O60826 627 aa5.61□□□□□ -1.51
PTCD3-208ENST00000469585 WDR1O75083 606 aa5.61□□□□□ -1.51
PTCD3-208ENST00000469585 GMNNO75496 209 aa5.61□□□□□ -1.51
PTCD3-208ENST00000469585 UTS2O95399 124 aa5.61□□□□□ -1.51
PTCD3-208ENST00000469585 NR2F1P10589 423 aa5.61□□□□□ -1.51
PTCD3-208ENST00000469585 EFNA1P20827 205 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-208ENST00000469585 RFC3P40938 356 aa5.61□□□□□ -1.51
PTCD3-208ENST00000469585 CASP3P42574 277 aa5.61□□□□□ -1.51
PTCD3-208ENST00000469585 FRKP42685 505 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-208ENST00000469585 CRATP43155 626 aa5.61□□□□□ -1.51
PTCD3-208ENST00000469585 MAGEA5P43359 124 aa5.61□□□□□ -1.51
PTCD3-208ENST00000469585 TRPC1P48995 793 aa5.61□□□□□ -1.51
PTCD3-208ENST00000469585 CDK9P50750 372 aaKnown RBP5.61□□□□□ -1.51
PTCD3-208ENST00000469585 ATP4BP51164 291 aa5.61□□□□□ -1.51
PTCD3-208ENST00000469585 CCR4P51679 360 aa5.61□□□□□ -1.51
PTCD3-208ENST00000469585 CRISP3P54108 245 aa5.61□□□□□ -1.51
PTCD3-208ENST00000469585 RPS3AP61247 264 aaKnown RBP5.61□□□□□ -1.51
PTCD3-208ENST00000469585 PMP22Q01453 160 aa5.61□□□□□ -1.51
PTCD3-208ENST00000469585 STX5Q13190 355 aa5.61□□□□□ -1.51
PTCD3-208ENST00000469585 ZSWIM7Q19AV6 140 aa5.61□□□□□ -1.51
PTCD3-208ENST00000469585 ZNF630Q2M218 657 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-208ENST00000469585 EIF2S3LQ2VIR3 472 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms