RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 TEKQ02763 1124 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 ATP1A4Q13733 1029 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 GINS1Q14691 196 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 SLC25A30Q5SVS4 291 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 B3GNTL1Q67FW5 361 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-208ENST00000468300 ARSKQ6UWY0 536 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 ADGRG3Q86Y34 549 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 LIPHQ8WWY8 451 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 PTDSS2Q9BVG9 487 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 OSGIN1Q9UJX0 560 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 UNC119BA6NIH7 251 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 SHOXO15266 292 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 ACVR2AP27037 513 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 TACR3P29371 465 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 RPS15P62841 145 aaKnown RBP7.49□□□□□ -1.21
BRCA1-208ENST00000468300 FADS6Q8N9I5 356 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 BPIFB6Q8NFQ5 453 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 TMCO6Q96DC7 493 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 KTI12Q96EK9 354 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-208ENST00000468300 TMEM43Q9BTV4 400 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 ING2Q9H160 280 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 ERVK-18Q9QC07 812 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 PSORS1C1Q9UIG5 152 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 YARS2Q9Y2Z4 477 aaKnown RBP7.49□□□□□ -1.21
BRCA1-208ENST00000468300 MED31Q9Y3C7 131 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 TRAV27A0A087WT01 109 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 A0A1B0GWJ7 208 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 ZC3H12DA2A288 527 aaKnown RBP7.49□□□□□ -1.21
BRCA1-208ENST00000468300 H3BN98 237 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 SURF4O15260 269 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 DOK2O60496 412 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 CLN5O75503 358 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 DXOO77932 396 aaKnown RBP7.49□□□□□ -1.21
BRCA1-208ENST00000468300 SLC2A10O95528 541 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 CCL3P10147 92 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 WT1P19544 449 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-208ENST00000468300 IFNGR2P38484 337 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 SLC6A8P48029 635 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 DBPQ10586 325 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-208ENST00000468300 QPRTQ15274 297 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 NADK2Q4G0N4 442 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 C1QL3Q5VWW1 255 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 GTF2IRD2BQ6EKJ0 949 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 ZNF773Q6PK81 442 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 SLC22A25Q6T423 547 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 GTF2IRD2Q86UP8 949 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 LRRC75AQ8NAA5 344 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 GGHQ92820 318 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 ANAPC16Q96DE5 110 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 SAMD8Q96LT4 415 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 POLDIP3Q9BY77 421 aaKnown RBP7.49□□□□□ -1.21
BRCA1-208ENST00000468300 OR52D1Q9H346 318 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 CPNE5Q9HCH3 593 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 HHATLQ9HCP6 504 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 MED11Q9P086 117 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 ENOPH1Q9UHY7 261 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 FBXL2Q9UKC9 423 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 WIF1Q9Y5W5 379 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 CDH10Q9Y6N8 788 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 CUL9Q8IWT3 2517 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 TMEM72A0PK05 275 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 ANKUB1A6NFN9 424 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 SLC30A4O14863 429 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 ENTPD6O75354 484 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 ASAH2BP0C7U1 165 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 HOXB1P14653 301 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-208ENST00000468300 PRKCAP17252 672 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 NOVA1P51513 510 aaKnown RBP7.48□□□□□ -1.21
BRCA1-208ENST00000468300 NKX2-5P52952 324 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-208ENST00000468300 CRYZQ08257 329 aaKnown RBP7.48□□□□□ -1.21
BRCA1-208ENST00000468300 CBFBQ13951 182 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 CLEC12AQ5QGZ9 265 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 ATP1A1-AS1Q5TC04 95 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 MDGA2Q7Z553 956 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 MISPQ8IVT2 679 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 PAQR8Q8TEZ7 354 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 TMEM68Q96MH6 324 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 TNFRSF13CQ96RJ3 184 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 IL4I1Q96RQ9 567 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 CCNL2Q96S94 520 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-208ENST00000468300 SLC19A3Q9BZV2 496 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 UBQLN3Q9H347 655 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 DDX28Q9NUL7 540 aaKnown RBP7.48□□□□□ -1.21
BRCA1-208ENST00000468300 GVINP1Q7Z2Y8 2422 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 SCAF4O95104 1147 aaKnown RBP7.48□□□□□ -1.21
BRCA1-208ENST00000468300 SERPINA7P05543 415 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 CLUP10909 449 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 LIFP15018 202 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 IL11P20809 199 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 CCR4P51679 360 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 NUDT6P53370 316 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 PMS2P3Q13401 168 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 ZNF74Q16587 644 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 SLC25A53Q5H9E4 307 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 IL20RBQ6UXL0 311 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 RPS19BP1Q86WX3 136 aaKnown RBP7.48□□□□□ -1.21
BRCA1-208ENST00000468300 OR2M3Q8NG83 312 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 TAAR8Q969N4 342 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 ANGPTL4Q9BY76 406 aa7.48□□□□□ -1.21
BRCA1-208ENST00000468300 SP140LQ9H930 580 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms