RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 ZBTB25P24278 435 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 KRTAP5-9P26371 169 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 OPRD1P41143 372 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 PLK1P53350 603 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 CRYBB1P53674 252 aaPredicted RBP3.03□□□□□ -1.92
VPS13A-209ENST00000467124 SCRN3Q0VDG4 424 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 PDIA2Q13087 525 aaKnown RBP3.03□□□□□ -1.92
VPS13A-209ENST00000467124 TGFBIQ15582 683 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 XKR7Q5GH72 579 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 MARCH8Q5T0T0 291 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 C1orf185Q5T7R7 199 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 CARD17Q5XLA6 110 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 LRRC66Q68CR7 880 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 TIGD3Q6B0B8 471 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 ZNF544Q6NX49 715 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 C1orf94Q6P1W5 598 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 LRRC74BQ6ZQY2 392 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 ERI1Q8IV48 349 aaKnown RBP3.03□□□□□ -1.92
VPS13A-209ENST00000467124 C6orf223Q8N319 242 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 FANK1Q8TC84 345 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 AGR3Q8TD06 166 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 KIFAP3Q92845 792 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 NUS1Q96E22 293 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 IFT74Q96LB3 600 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 PLEKHF1Q96S99 279 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 MBOAT4Q96T53 435 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 PYGO2Q9BRQ0 406 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 C19orf24Q9BVV8 132 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 INPP5EQ9NRR6 644 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 PLSCR3Q9NRY6 295 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 RAB20Q9NX57 234 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 KIAA1257Q9ULG3 409 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 CA5BQ9Y2D0 317 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 TMED5Q9Y3A6 229 aa3.03□□□□□ -1.92
VPS13A-209ENST00000467124 CHD4Q14839 1912 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 A0A075B6Q4 140 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 IGHV1OR21-1A0A087WYE8 117 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 IGKV3D-20A0A0C4DH25 116 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 DLGAP1O14490 977 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 GOSR2O14653 212 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 TNFSF11O14788 317 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 LYPLA1O75608 230 aaPredicted RBP3.02□□□□□ -1.93
VPS13A-209ENST00000467124 IGHV3-23P01764 117 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 HSPB1P04792 205 aaKnown RBP3.02□□□□□ -1.93
VPS13A-209ENST00000467124 ANXA5P08758 320 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 TROVE2P10155 538 aaKnown RBP eCLIP3.02□□□□□ -1.93
VPS13A-209ENST00000467124 PSMB1P20618 241 aaKnown RBP3.02□□□□□ -1.93
VPS13A-209ENST00000467124 CCNCP24863 283 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 BTCP35070 178 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 SSR1P43307 286 aaKnown RBP3.02□□□□□ -1.93
VPS13A-209ENST00000467124 SYKP43405 635 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 VDAC2P45880 294 aaPredicted RBP3.02□□□□□ -1.93
VPS13A-209ENST00000467124 KPNA2P52292 529 aaKnown RBP3.02□□□□□ -1.93
VPS13A-209ENST00000467124 CDH6P55285 790 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 EGFEM1PQ0D2K5 195 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 PPP1R7Q15435 360 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 SLC1A5Q15758 541 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 ZNF77Q15935 545 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 KYAT1Q16773 422 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 SLC25A30Q5SVS4 291 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 TMEM179BQ7Z7N9 219 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 P2RY8Q86VZ1 359 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 ZBED8Q8IZ13 594 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 RDH10Q8IZV5 341 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 SPATA4Q8NEY3 305 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 OR52K2Q8NGK3 314 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 OR9G1Q8NH87 305 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 DCUN1D4Q92564 292 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 TMEM59Q9BXS4 323 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 HES7Q9BYE0 225 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 POLR2J2Q9GZM3 115 aaKnown RBP3.02□□□□□ -1.93
VPS13A-209ENST00000467124 POLR2J3Q9H1A7 115 aaKnown RBP3.02□□□□□ -1.93
VPS13A-209ENST00000467124 ZNF702PQ9H963 129 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 DDX18Q9NVP1 670 aaKnown RBP3.02□□□□□ -1.93
VPS13A-209ENST00000467124 CD274Q9NZQ7 290 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 KIF25Q9UIL4 384 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 PITPNC1Q9UKF7 332 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 STARD10Q9Y365 291 aa3.02□□□□□ -1.93
VPS13A-209ENST00000467124 NINLQ9Y2I6 1382 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 FRMPD3Q5JV73 1810 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 IGHV7-81A0A0B4J1V7 117 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 FAM168BA1KXE4 195 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 ZFP92A6NM28 416 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 TIMP1P01033 207 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 IGHV3-48P01763 117 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 MCF2P10911 925 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 CD1EP15812 388 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 ZP3P21754 424 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 GALP22466 123 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 IL12AP29459 219 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 ATP5C1P36542 298 aaKnown RBP3.01□□□□□ -1.93
VPS13A-209ENST00000467124 KCNJ2P63252 427 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 IRX3P78415 501 aaPredicted RBP3.01□□□□□ -1.93
VPS13A-209ENST00000467124 ACVR1Q04771 509 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 ASPHQ12797 758 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 KIAA0040Q15053 153 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 PARP15Q460N3 678 aa3.01□□□□□ -1.93
VPS13A-209ENST00000467124 KLF17Q5JT82 389 aaPredicted RBP3.01□□□□□ -1.93
VPS13A-209ENST00000467124 PAGE3Q5JUK9 113 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms