RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 OR6X1Q8NH79 312 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 SRSF12Q8WXF0 261 aaKnown RBP2.75□□□□□ -1.97
LRCH3-211ENST00000466054 RDH5Q92781 318 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 UFD1Q92890 307 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 ZNF285Q96NJ3 590 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 MRPL45Q9BRJ2 306 aaKnown RBP2.75□□□□□ -1.97
LRCH3-211ENST00000466054 ROGDIQ9GZN7 287 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 RANBP3Q9H6Z4 567 aaPredicted RBP2.75□□□□□ -1.97
LRCH3-211ENST00000466054 YY1AP1Q9H869 796 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 IL26Q9NPH9 171 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 GLRX2Q9NS18 164 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 ATP10AO60312 1499 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 TCRBV9S1A1TA0A576 114 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 PCP4L1A6NKN8 68 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 CAPN1P07384 714 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 RCC1P18754 421 aaPredicted RBP2.74□□□□□ -1.97
LRCH3-211ENST00000466054 TBPP20226 339 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 HMGB2P26583 209 aaKnown RBP2.74□□□□□ -1.97
LRCH3-211ENST00000466054 SSR1P43307 286 aaKnown RBP2.74□□□□□ -1.97
LRCH3-211ENST00000466054 VDAC2P45880 294 aaPredicted RBP2.74□□□□□ -1.97
LRCH3-211ENST00000466054 CCT3P49368 545 aaKnown RBP2.74□□□□□ -1.97
LRCH3-211ENST00000466054 DUSP3P51452 185 aaPredicted RBP2.74□□□□□ -1.97
LRCH3-211ENST00000466054 GPM6AP51674 278 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 FGL1Q08830 312 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 GPM6BQ13491 265 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 GPNMBQ14956 572 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 DUSP7Q16829 419 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 Q6P435 159 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 Q6ZN92 141 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 ACP7Q6ZNF0 438 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 RALGPS2Q86X27 583 aaPredicted RBP2.74□□□□□ -1.97
LRCH3-211ENST00000466054 ENTHD1Q8IYW4 607 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 FAM133AQ8N9E0 248 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 IPMKQ8NFU5 416 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 OR9G1Q8NH87 305 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 CXorf40BQ96DE9 158 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 CMTM7Q96FZ5 175 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 ITCHQ96J02 903 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 FCRL1Q96LA6 429 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 RPRD1AQ96P16 312 aaPredicted RBP2.74□□□□□ -1.97
LRCH3-211ENST00000466054 OR2M2Q96R28 347 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 NAT9Q9BTE0 207 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 THUMPD1Q9NXG2 353 aaKnown RBP2.74□□□□□ -1.97
LRCH3-211ENST00000466054 BFARQ9NZS9 450 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 SEC14L3Q9UDX4 400 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 CDH9Q9ULB4 789 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 RAB26Q9ULW5 256 aa2.74□□□□□ -1.97
LRCH3-211ENST00000466054 ASTN1O14525 1302 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 PHF3Q92576 2039 aaKnown RBP2.73□□□□□ -1.97
LRCH3-211ENST00000466054 ARHGAP21Q5T5U3 1957 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 TRBV6-6A0A0A6YYG2 114 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 A0A0G2JN53 185 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 GPR89AB7ZAQ6 455 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 CLDN9O95484 217 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 OXSR1O95747 527 aaPredicted RBP2.73□□□□□ -1.97
LRCH3-211ENST00000466054 GPR89BP0CG08 455 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 FMO3P31513 532 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 GBX2P52951 348 aaPredicted RBP2.73□□□□□ -1.97
LRCH3-211ENST00000466054 ANKDD1AQ495B1 522 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 FILIP1LQ4L180 1135 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 DMRTC1Q5HYR2 192 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 CTRB2Q6GPI1 263 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 ZSCAN25Q6NSZ9 544 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 ZNF429Q86V71 674 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 ARIH2OSQ8N7S6 290 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 MDS2Q8NDY4 140 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 OR52H1Q8NGJ2 320 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 OR10G9Q8NGN4 311 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 MAGEE2Q8TD90 523 aaPredicted RBP2.73□□□□□ -1.97
LRCH3-211ENST00000466054 ARPC1AQ92747 370 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 SLC41A3Q96GZ6 507 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 OXGR1Q96P68 337 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 SLC38A2Q96QD8 506 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 TMEM246Q9BRR3 403 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 SLC39A3Q9BRY0 314 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 CRACR2AQ9BSW2 395 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 TMEM43Q9BTV4 400 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 RIOK2Q9BVS4 552 aaKnown RBP2.73□□□□□ -1.97
LRCH3-211ENST00000466054 CAPS2Q9BXY5 557 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 GORASP2Q9H8Y8 452 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 EML4Q9HC35 981 aaKnown RBP2.73□□□□□ -1.97
LRCH3-211ENST00000466054 MYOZ2Q9NPC6 264 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 KCNIP1Q9NZI2 227 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 PTBP2Q9UKA9 531 aaKnown RBP2.73□□□□□ -1.97
LRCH3-211ENST00000466054 N6AMT1Q9Y5N5 214 aa2.73□□□□□ -1.97
LRCH3-211ENST00000466054 NSG1A0A0A6YYJ2 146 aa2.72□□□□□ -1.97
LRCH3-211ENST00000466054 CLRN2A0PK11 232 aa2.72□□□□□ -1.97
LRCH3-211ENST00000466054 A6NDX4 124 aa2.72□□□□□ -1.97
LRCH3-211ENST00000466054 FAM166BA8MTA8 275 aa2.72□□□□□ -1.97
LRCH3-211ENST00000466054 MTX2O75431 263 aa2.72□□□□□ -1.97
LRCH3-211ENST00000466054 MMP1P03956 469 aa2.72□□□□□ -1.97
LRCH3-211ENST00000466054 OPN1MWP04001 364 aa2.72□□□□□ -1.97
LRCH3-211ENST00000466054 GIPP09681 153 aaPredicted RBP2.72□□□□□ -1.97
LRCH3-211ENST00000466054 OPN1MW2P0DN77 364 aa2.72□□□□□ -1.97
LRCH3-211ENST00000466054 OPN1MW3P0DN78 364 aa2.72□□□□□ -1.97
LRCH3-211ENST00000466054 TOP1P11387 765 aaKnown RBP2.72□□□□□ -1.97
LRCH3-211ENST00000466054 TDGF1P13385 188 aa2.72□□□□□ -1.97
LRCH3-211ENST00000466054 ADRB3P13945 408 aa2.72□□□□□ -1.97
LRCH3-211ENST00000466054 PCMT1P22061 227 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms