RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 LIMS1P48059 325 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 AGFG1P52594 562 aaKnown RBP8.47□□□□□ -1.05
ATG3-203ENST00000465980 CDH12P55289 794 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 PIN1Q13526 163 aaPredicted RBP8.47□□□□□ -1.05
ATG3-203ENST00000465980 GANABQ14697 944 aaKnown RBP8.47□□□□□ -1.05
ATG3-203ENST00000465980 HSPB2Q16082 182 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 ENTPD8Q5MY95 495 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 VASNQ6EMK4 673 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 TBPL2Q6SJ96 375 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 ARSKQ6UWY0 536 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 PLXDC2Q6UX71 529 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 IZUMO2Q6UXV1 221 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 APOOLQ6UXV4 268 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 ZNF550Q7Z398 422 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 STK32CQ86UX6 486 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 RANBP3LQ86VV4 465 aaPredicted RBP8.47□□□□□ -1.05
ATG3-203ENST00000465980 TSPYL5Q86VY4 417 aaPredicted RBP8.47□□□□□ -1.05
ATG3-203ENST00000465980 WFDC3Q8IUB2 231 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 ZNF440Q8IYI8 595 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 OFCC1Q8IZS5 231 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 CBR4Q8N4T8 237 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 RELL2Q8NC24 303 aaPredicted RBP8.47□□□□□ -1.05
ATG3-203ENST00000465980 OR14L1PQ8NHC6 308 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 RNF138Q8WVD3 245 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 ABTB1Q969K4 478 aaPredicted RBP8.47□□□□□ -1.05
ATG3-203ENST00000465980 TMCO6Q96DC7 493 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 TMEM41AQ96HV5 264 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 MCHR1Q99705 422 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 FNDC11Q9BVV2 318 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 GABARAPL1Q9H0R8 117 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 NMNAT1Q9HAN9 279 aaPredicted RBP8.47□□□□□ -1.05
ATG3-203ENST00000465980 EXOSC3Q9NQT5 275 aaKnown RBP8.47□□□□□ -1.05
ATG3-203ENST00000465980 USE1Q9NZ43 259 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 KCNN3Q9UGI6 736 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 TESQ9UGI8 421 aaKnown RBP8.47□□□□□ -1.05
ATG3-203ENST00000465980 U3KQV3 271 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 TLN2Q9Y4G6 2542 aa8.47□□□□□ -1.05
ATG3-203ENST00000465980 A0A1W2PRQ8 180 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 AHRRA9YTQ3 701 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 EEF1E1-BLOC1S5C9J1V9 151 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 DVL2O14641 736 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 EI24O14681 340 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 EEF1E1O43324 174 aaKnown RBP8.46□□□□□ -1.06
ATG3-203ENST00000465980 NDUFB5O43674 189 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 HPRP00739 348 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 GKN3PP0CG01 181 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 THRBP10828 461 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 UBL4AP11441 157 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 PRG2P13727 222 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 IFNA8P32881 189 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 EVI2BP34910 448 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 CLK3P49761 638 aaKnown RBP8.46□□□□□ -1.06
ATG3-203ENST00000465980 ALDH3A2P51648 485 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 TAS2R41P59536 307 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 HOXC5Q00444 222 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 SRYQ05066 204 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 ST3GAL3Q11203 375 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 PPP1R8Q12972 351 aaKnown RBP8.46□□□□□ -1.06
ATG3-203ENST00000465980 SKP2Q13309 424 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 DAG1Q14118 895 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 DGCR6Q14129 220 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 CD226Q15762 336 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 MICAQ29983 383 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 EXOC3L2Q2M3D2 409 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 OR5M10Q6IEU7 315 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 SLC30A6Q6NXT4 461 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 PLEKHM3Q6ZWE6 761 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 MISPQ8IVT2 679 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 PM20D2Q8IYS1 436 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 HS3ST5Q8IZT8 346 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 GALNT4Q8N4A0 578 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 PHOSPHO1Q8TCT1 267 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 WDYHV1Q96HA8 205 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 ALPK1Q96QP1 1244 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 ZNF184Q99676 751 aaPredicted RBP8.46□□□□□ -1.06
ATG3-203ENST00000465980 RBM4BQ9BQ04 359 aaKnown RBP8.46□□□□□ -1.06
ATG3-203ENST00000465980 PSD2Q9BQI7 771 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 RBM4Q9BWF3 364 aaKnown RBP8.46□□□□□ -1.06
ATG3-203ENST00000465980 TBL1XR1Q9BZK7 514 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 TRIM2Q9C040 744 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 PRDM14Q9GZV8 571 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 LAT2Q9GZY6 243 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 ANKRD19PQ9H560 264 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 RHCGQ9UBD6 479 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 PRDM4Q9UKN5 801 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 TMCC3Q9ULS5 477 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 LRRC42Q9Y546 428 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 MAGED1Q9Y5V3 778 aaPredicted RBP8.46□□□□□ -1.06
ATG3-203ENST00000465980 VPS13CQ709C8 3753 aa8.46□□□□□ -1.06
ATG3-203ENST00000465980 ZNF469Q96JG9 3925 aaPredicted RBP8.46□□□□□ -1.06
ATG3-203ENST00000465980 TRAPPC13A5PLN9 417 aa8.45□□□□□ -1.06
ATG3-203ENST00000465980 ARRDC5A6NEK1 342 aa8.45□□□□□ -1.06
ATG3-203ENST00000465980 CPSF4LA6NMK7 179 aaKnown RBP8.45□□□□□ -1.06
ATG3-203ENST00000465980 GTPBP1O00178 669 aaKnown RBP8.45□□□□□ -1.06
ATG3-203ENST00000465980 FAAHO00519 579 aa8.45□□□□□ -1.06
ATG3-203ENST00000465980 ZNF264O43296 627 aa8.45□□□□□ -1.06
ATG3-203ENST00000465980 SCO2O43819 266 aa8.45□□□□□ -1.06
ATG3-203ENST00000465980 EIF4E2O60573 245 aaKnown RBP8.45□□□□□ -1.06
ATG3-203ENST00000465980 CYP7B1O75881 506 aa8.45□□□□□ -1.06
ATG3-203ENST00000465980 ANGPTL1O95841 491 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms