RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 SPATC1Q76KD6 591 aa12.78□□□□□ -0.36
HDAC6-214ENST00000465269 GPAT4Q86UL3 456 aa12.78□□□□□ -0.36
HDAC6-214ENST00000465269 MDP1Q86V88 176 aa12.78□□□□□ -0.36
HDAC6-214ENST00000465269 CNPY4Q8N129 248 aa12.78□□□□□ -0.36
HDAC6-214ENST00000465269 POMGNT2Q8NAT1 580 aa12.78□□□□□ -0.36
HDAC6-214ENST00000465269 ZNF563Q8TA94 476 aa12.78□□□□□ -0.36
HDAC6-214ENST00000465269 ADAMTS15Q8TE58 950 aa12.78□□□□□ -0.36
HDAC6-214ENST00000465269 TMEM234Q8WY98 164 aa12.78□□□□□ -0.36
HDAC6-214ENST00000465269 TMEM45BQ96B21 275 aa12.78□□□□□ -0.36
HDAC6-214ENST00000465269 MS4A3Q96HJ5 214 aa12.78□□□□□ -0.36
HDAC6-214ENST00000465269 BOD1Q96IK1 185 aa12.78□□□□□ -0.36
HDAC6-214ENST00000465269 REEP4Q9H6H4 257 aa12.78□□□□□ -0.36
HDAC6-214ENST00000465269 OXSMQ9NWU1 459 aa12.78□□□□□ -0.36
HDAC6-214ENST00000465269 DCDC2Q9UHG0 476 aa12.78□□□□□ -0.36
HDAC6-214ENST00000465269 MID2Q9UJV3 735 aa12.78□□□□□ -0.36
HDAC6-214ENST00000465269 MKLN1Q9UL63 735 aa12.78□□□□□ -0.36
HDAC6-214ENST00000465269 TMEM72A0PK05 275 aa12.77□□□□□ -0.37
HDAC6-214ENST00000465269 COPEO14579 308 aa12.77□□□□□ -0.37
HDAC6-214ENST00000465269 DNPH1O43598 174 aa12.77□□□□□ -0.37
HDAC6-214ENST00000465269 SASH3O75995 380 aa12.77□□□□□ -0.37
HDAC6-214ENST00000465269 TSPAN15O95858 294 aa12.77□□□□□ -0.37
HDAC6-214ENST00000465269 IGHV2-5P01817 119 aa12.77□□□□□ -0.37
HDAC6-214ENST00000465269 ENO1P06733 434 aaKnown RBP12.77□□□□□ -0.37
HDAC6-214ENST00000465269 ANPEPP15144 967 aa12.77□□□□□ -0.37
HDAC6-214ENST00000465269 APOBEC1P41238 236 aaKnown RBP12.77□□□□□ -0.37
HDAC6-214ENST00000465269 CCT5P48643 541 aa12.77□□□□□ -0.37
HDAC6-214ENST00000465269 ARF1P84077 181 aaKnown RBP12.77□□□□□ -0.37
HDAC6-214ENST00000465269 LCP2Q13094 533 aa12.77□□□□□ -0.37
HDAC6-214ENST00000465269 KIAA0040Q15053 153 aa12.77□□□□□ -0.37
HDAC6-214ENST00000465269 OTUD3Q5T2D3 398 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-214ENST00000465269 Q6ZPA2 131 aa12.77□□□□□ -0.37
HDAC6-214ENST00000465269 OR7D2Q96RA2 312 aa12.77□□□□□ -0.37
HDAC6-214ENST00000465269 SDF2Q99470 211 aa12.77□□□□□ -0.37
HDAC6-214ENST00000465269 ACTRT3Q9BYD9 372 aa12.77□□□□□ -0.37
HDAC6-214ENST00000465269 TMBIM4Q9HC24 238 aa12.77□□□□□ -0.37
HDAC6-214ENST00000465269 MID1IP1Q9NPA3 183 aa12.77□□□□□ -0.37
HDAC6-214ENST00000465269 GPATCH2Q9NW75 528 aa12.77□□□□□ -0.37
HDAC6-214ENST00000465269 ZNF446Q9NWS9 450 aa12.77□□□□□ -0.37
HDAC6-214ENST00000465269 SPIN1Q9Y657 262 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-214ENST00000465269 CACNG2Q9Y698 323 aa12.77□□□□□ -0.37
HDAC6-214ENST00000465269 IGHV3OR16-10A0A075B7F0 116 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 SERTM1A2A2V5 107 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 TMEM229AB2RXF0 380 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 AP3D1O14617 1153 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 SEC22BO75396 215 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 UGT2B17O75795 530 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 RSL1D1O76021 490 aaKnown RBP12.76□□□□□ -0.37
HDAC6-214ENST00000465269 GPANK1O95872 356 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 KNG1P01042 644 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 GSTA1P08263 222 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 CBR1P16152 277 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 SDC1P18827 310 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 NR4A1P22736 598 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 CRHR1P34998 444 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 SLC35A1P78382 337 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 PLAURQ03405 335 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 C3orf36Q3SXR2 165 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 C1QTNF12Q5T7M4 302 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 BRICD5Q6PL45 260 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 WDFY1Q8IWB7 410 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 OR5AK3PQ8NH89 298 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 RAB8BQ92930 207 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 UBE2FQ969M7 185 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 SLC25A28Q96A46 364 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 ZNF837Q96EG3 531 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-214ENST00000465269 RBM4BQ9BQ04 359 aaKnown RBP12.76□□□□□ -0.37
HDAC6-214ENST00000465269 NAA11Q9BSU3 229 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-214ENST00000465269 MS4A5Q9H3V2 200 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 VIPAS39Q9H9C1 493 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 TRAPPC4Q9Y296 219 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 CCL27Q9Y4X3 112 aa12.76□□□□□ -0.37
HDAC6-214ENST00000465269 TMED7-TICAM2A0A0A6YYA0 188 aa12.75□□□□□ -0.37
HDAC6-214ENST00000465269 MDFIC2A0A1B0GVS7 189 aa12.75□□□□□ -0.37
HDAC6-214ENST00000465269 CLDN24A6NM45 220 aa12.75□□□□□ -0.37
HDAC6-214ENST00000465269 GLRA3O75311 464 aa12.75□□□□□ -0.37
HDAC6-214ENST00000465269 GSNP06396 782 aa12.75□□□□□ -0.37
HDAC6-214ENST00000465269 PKNOX1P55347 436 aa12.75□□□□□ -0.37
HDAC6-214ENST00000465269 ROR2Q01974 943 aaKnown RBP12.75□□□□□ -0.37
HDAC6-214ENST00000465269 POU3F1Q03052 451 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-214ENST00000465269 PDE7AQ13946 482 aa12.75□□□□□ -0.37
HDAC6-214ENST00000465269 CEACAM7Q14002 265 aa12.75□□□□□ -0.37
HDAC6-214ENST00000465269 TNFAIP8L3Q5GJ75 292 aa12.75□□□□□ -0.37
HDAC6-214ENST00000465269 NIPAL3Q6P499 406 aa12.75□□□□□ -0.37
HDAC6-214ENST00000465269 C17orf107Q6ZR85 190 aa12.75□□□□□ -0.37
HDAC6-214ENST00000465269 GRINAQ7Z429 371 aa12.75□□□□□ -0.37
HDAC6-214ENST00000465269 CLEC4FQ8N1N0 589 aa12.75□□□□□ -0.37
HDAC6-214ENST00000465269 FAM76AQ8TAV0 307 aa12.75□□□□□ -0.37
HDAC6-214ENST00000465269 ZNF416Q9BWM5 594 aa12.75□□□□□ -0.37
HDAC6-214ENST00000465269 GSTO2Q9H4Y5 243 aa12.75□□□□□ -0.37
HDAC6-214ENST00000465269 DUSP13Q9UII6 198 aa12.75□□□□□ -0.37
HDAC6-214ENST00000465269 EMCNQ9ULC0 261 aa12.75□□□□□ -0.37
HDAC6-214ENST00000465269 FAF1Q9UNN5 650 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-214ENST00000465269 TMED7Q9Y3B3 224 aa12.75□□□□□ -0.37
HDAC6-214ENST00000465269 DNAH3Q8TD57 4116 aa12.74□□□□□ -0.37
HDAC6-214ENST00000465269 M0QZ24 198 aa12.74□□□□□ -0.37
HDAC6-214ENST00000465269 EIF1BO60739 113 aaKnown RBP12.74□□□□□ -0.37
HDAC6-214ENST00000465269 IMPDH1P20839 514 aa12.74□□□□□ -0.37
HDAC6-214ENST00000465269 PGM1P36871 562 aa12.74□□□□□ -0.37
HDAC6-214ENST00000465269 CAPZA2P47755 286 aa12.74□□□□□ -0.37
HDAC6-214ENST00000465269 IDH2P48735 452 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms