RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 VRK1Q99986 396 aaPredicted RBP12.11□□□□□ -0.47
RPP40-203ENST00000464646 TMBIM4Q9HC24 238 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 SELENONQ9NZV5 590 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 SLC13A4Q9UKG4 626 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 ADAM21Q9UKJ8 722 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 PCDHB14Q9Y5E9 798 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 USH1CQ9Y6N9 552 aa12.11□□□□□ -0.47
RPP40-203ENST00000464646 A8MV72 311 aaPredicted RBP12.1□□□□□ -0.47
RPP40-203ENST00000464646 NR5A2O00482 541 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 TLX2O43763 284 aaPredicted RBP12.1□□□□□ -0.47
RPP40-203ENST00000464646 THBS1P07996 1170 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 NUDT7P0C024 238 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 ZCCHC18P0CG32 403 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 ZNF43P17038 809 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 DSCR9P59020 149 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 TUBA1BP68363 451 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 TUBA4AP68366 448 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 SLC25A3Q00325 362 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 RGNQ15493 299 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 MAPK11Q15759 364 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 ZSWIM7Q19AV6 140 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 TBRG1Q3YBR2 411 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 RNF220Q5VTB9 566 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 MSANTD1Q6ZTZ1 278 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 TUBA1AQ71U36 451 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 MAVSQ7Z434 540 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 GOLGA6L1Q8N7Z2 621 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 NFKBIDQ8NI38 313 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 BBS10Q8TAM1 723 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 LRRC8CQ8TDW0 803 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 C3orf49Q96BT1 292 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 GRIP2Q9C0E4 1043 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.1□□□□□ -0.47
RPP40-203ENST00000464646 RASD1Q9Y272 281 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 TLN2Q9Y4G6 2542 aa12.1□□□□□ -0.47
RPP40-203ENST00000464646 A0A096LPI6 279 aa12.09□□□□□ -0.47
RPP40-203ENST00000464646 PDLIM1O00151 329 aa12.09□□□□□ -0.47
RPP40-203ENST00000464646 LY6HO94772 140 aa12.09□□□□□ -0.47
RPP40-203ENST00000464646 VAMP5O95183 116 aa12.09□□□□□ -0.47
RPP40-203ENST00000464646 KRTAP1-1Q07627 177 aa12.09□□□□□ -0.47
RPP40-203ENST00000464646 CHRFAM7AQ494W8 412 aa12.09□□□□□ -0.47
RPP40-203ENST00000464646 GCNT6Q5T4J0 391 aa12.09□□□□□ -0.47
RPP40-203ENST00000464646 AP1ARQ63HQ0 302 aa12.09□□□□□ -0.47
RPP40-203ENST00000464646 C11orf71Q6IPW1 123 aa12.09□□□□□ -0.47
RPP40-203ENST00000464646 CREB3L2Q70SY1 520 aa12.09□□□□□ -0.47
RPP40-203ENST00000464646 SLC46A3Q7Z3Q1 461 aa12.09□□□□□ -0.47
RPP40-203ENST00000464646 GPR137CQ8N3F9 429 aa12.09□□□□□ -0.47
RPP40-203ENST00000464646 C10orf53Q8N6V4 93 aa12.09□□□□□ -0.47
RPP40-203ENST00000464646 ZIC4Q8N9L1 334 aa12.09□□□□□ -0.47
RPP40-203ENST00000464646 OR1K1Q8NGR3 316 aa12.09□□□□□ -0.47
RPP40-203ENST00000464646 STK35Q8TDR2 534 aa12.09□□□□□ -0.47
RPP40-203ENST00000464646 MAELQ96JY0 434 aaKnown RBP12.09□□□□□ -0.47
RPP40-203ENST00000464646 KCNK17Q96T54 332 aa12.09□□□□□ -0.47
RPP40-203ENST00000464646 TCF7L2Q9NQB0 619 aa12.09□□□□□ -0.47
RPP40-203ENST00000464646 SDR39U1Q9NRG7 319 aaPredicted RBP12.09□□□□□ -0.47
RPP40-203ENST00000464646 CCDC167Q9P0B6 97 aa12.09□□□□□ -0.47
RPP40-203ENST00000464646 FKBP7Q9Y680 259 aa12.09□□□□□ -0.47
RPP40-203ENST00000464646 NIPBLQ6KC79 2804 aaeCLIP12.09□□□□□ -0.47
RPP40-203ENST00000464646 UPK3AO75631 287 aa12.08□□□□□ -0.48
RPP40-203ENST00000464646 CRYAAP02489 173 aa12.08□□□□□ -0.48
RPP40-203ENST00000464646 PNMTP11086 282 aa12.08□□□□□ -0.48
RPP40-203ENST00000464646 NQO1P15559 274 aaKnown RBP12.08□□□□□ -0.48
RPP40-203ENST00000464646 SLC25A16P16260 332 aa12.08□□□□□ -0.48
RPP40-203ENST00000464646 MVDP53602 400 aa12.08□□□□□ -0.48
RPP40-203ENST00000464646 SNRPD2P62316 118 aaKnown RBP12.08□□□□□ -0.48
RPP40-203ENST00000464646 ROR2Q01974 943 aaKnown RBP12.08□□□□□ -0.48
RPP40-203ENST00000464646 GGTLC2Q14390 218 aa12.08□□□□□ -0.48
RPP40-203ENST00000464646 IQCCQ4KMZ1 466 aa12.08□□□□□ -0.48
RPP40-203ENST00000464646 CARD17Q5XLA6 110 aa12.08□□□□□ -0.48
RPP40-203ENST00000464646 KRT73Q86Y46 540 aa12.08□□□□□ -0.48
RPP40-203ENST00000464646 GTF2H4Q92759 462 aa12.08□□□□□ -0.48
RPP40-203ENST00000464646 SLC38A2Q96QD8 506 aa12.08□□□□□ -0.48
RPP40-203ENST00000464646 TNFRSF13CQ96RJ3 184 aa12.08□□□□□ -0.48
RPP40-203ENST00000464646 SPATA5L1Q9BVQ7 753 aa12.08□□□□□ -0.48
RPP40-203ENST00000464646 AMBRA1Q9C0C7 1298 aa12.08□□□□□ -0.48
RPP40-203ENST00000464646 PAIP1Q9H074 479 aaKnown RBP12.08□□□□□ -0.48
RPP40-203ENST00000464646 DSPPQ9NZW4 1301 aa12.08□□□□□ -0.48
RPP40-203ENST00000464646 OR6C65A6NJZ3 312 aa12.07□□□□□ -0.48
RPP40-203ENST00000464646 RNF212BA8MTL3 300 aa12.07□□□□□ -0.48
RPP40-203ENST00000464646 EVPLLA8MZ36 301 aa12.07□□□□□ -0.48
RPP40-203ENST00000464646 AIM2O14862 343 aa12.07□□□□□ -0.48
RPP40-203ENST00000464646 AKAP8O43823 692 aaKnown RBP12.07□□□□□ -0.48
RPP40-203ENST00000464646 SLC43A1O75387 559 aa12.07□□□□□ -0.48
RPP40-203ENST00000464646 SERPINI2O75830 405 aa12.07□□□□□ -0.48
RPP40-203ENST00000464646 PDLIM4P50479 330 aa12.07□□□□□ -0.48
RPP40-203ENST00000464646 EFNA4P52798 201 aa12.07□□□□□ -0.48
RPP40-203ENST00000464646 NPRL3Q12980 569 aa12.07□□□□□ -0.48
RPP40-203ENST00000464646 FADDQ13158 208 aa12.07□□□□□ -0.48
RPP40-203ENST00000464646 TMEM249Q2WGJ8 235 aa12.07□□□□□ -0.48
RPP40-203ENST00000464646 ALG10BQ5I7T1 473 aa12.07□□□□□ -0.48
RPP40-203ENST00000464646 PODNL1Q6PEZ8 512 aa12.07□□□□□ -0.48
RPP40-203ENST00000464646 EPGNQ6UW88 154 aa12.07□□□□□ -0.48
RPP40-203ENST00000464646 MFSD8Q8NHS3 518 aa12.07□□□□□ -0.48
RPP40-203ENST00000464646 SLC38A4Q969I6 547 aa12.07□□□□□ -0.48
RPP40-203ENST00000464646 TLCD1Q96CP7 247 aa12.07□□□□□ -0.48
RPP40-203ENST00000464646 SPDL1Q96EA4 605 aa12.07□□□□□ -0.48
RPP40-203ENST00000464646 KTI12Q96EK9 354 aaPredicted RBP12.07□□□□□ -0.48
RPP40-203ENST00000464646 REPIN1Q9BWE0 567 aaKnown RBP12.07□□□□□ -0.48
RPP40-203ENST00000464646 PIF1Q9H611 641 aa12.07□□□□□ -0.48
RPP40-203ENST00000464646 A4GALTQ9NPC4 353 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms