RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 RASD1Q9Y272 281 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 B3GALT5Q9Y2C3 310 aa12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 NOSIPQ9Y314 301 aaKnown RBP12.89□□□□□ -0.35
SQSTM1-205ENST00000464493 FREM1Q5H8C1 2179 aa12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 GYG2O15488 501 aa12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 FZD7O75084 574 aa12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 BGLAPP02818 100 aa12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 POU2F1P14859 743 aa12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 GRPRP30550 384 aa12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 RBM34P42696 430 aaKnown RBP12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 OR3A2P47893 321 aa12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 SORDQ00796 357 aa12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 LTBQ06643 244 aa12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 FOXD4Q12950 439 aaPredicted RBP12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 TFAP2EQ6VUC0 442 aa12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 H1FNTQ75WM6 255 aaPredicted RBP12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 NKAIN4Q8IVV8 208 aa12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 OR9K2Q8NGE7 335 aa12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 PYURFQ96I23 114 aa12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 HS6ST2Q96MM7 605 aa12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 THTPAQ9BU02 230 aa12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 FNDC11Q9BVV2 318 aa12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 FANCFQ9NPI8 374 aa12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 ACTR3BQ9P1U1 418 aa12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 CORINQ9Y5Q5 1042 aa12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 FLVCR1Q9Y5Y0 555 aa12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 UNC79Q9P2D8 2635 aa12.88□□□□□ -0.35
SQSTM1-205ENST00000464493 TUBAL3A6NHL2 446 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 LRRN3E7EW58 273 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 J3KTA2 159 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 M0R082 166 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 KPNA4O00629 521 aaPredicted RBP12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 FFAR1O14842 300 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 MRPL33O75394 65 aaKnown RBP12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 PDE5AO76074 875 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 MT-ATP6P00846 226 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 NTF4P34130 210 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 KIR2DL3P43628 341 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 BNIP1Q12981 228 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 TRIM25Q14258 630 aaKnown RBP12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 DNAL1Q4LDG9 190 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 CYP4Z1Q86W10 505 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 ZNF100Q8IYN0 542 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 KDM8Q8N371 416 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 FAM86B1Q8N7N1 296 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 SCAIQ8N9R8 606 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 ZNF417Q8TAU3 575 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 TMEM255BQ8WV15 326 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 TMEM239Q8WW34 195 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 MOGAT1Q96PD6 335 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 ZNF587Q96SQ5 575 aaPredicted RBP12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 BTBD10Q9BSF8 475 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 ASPNQ9BXN1 380 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 MUC13Q9H3R2 512 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 PARPBPQ9NWS1 579 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 RHCGQ9UBD6 479 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 SEC14L4Q9UDX3 406 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 ENPP4Q9Y6X5 453 aa12.87□□□□□ -0.35
SQSTM1-205ENST00000464493 C16orf97H3BN30 126 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 CH25HO95992 272 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 MT-ND1P03886 318 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 NQO1P15559 274 aaKnown RBP12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 UGT2B10P36537 528 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 UGT2B15P54855 530 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 MS4A2Q01362 244 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 POU4F3Q15319 338 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 ZNF74Q16587 644 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 CYP2R1Q6VVX0 501 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 CREB3L2Q70SY1 520 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 TSEN54Q7Z6J9 526 aaKnown RBP12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 DHFR2Q86XF0 187 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 OFCC1Q8IZS5 231 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 ZIC4Q8N9L1 334 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 ADPRHL1Q8NDY3 354 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 LINC01560Q8TB33 94 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 APH1AQ96BI3 265 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 SLC7A6OSQ96CW6 309 aaPredicted RBP12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 CLPTM1LQ96KA5 538 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 C7orf34Q96L11 122 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 OXGR1Q96P68 337 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 ZNF385AQ96PM9 386 aaKnown RBP12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 KLHL4Q9C0H6 718 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 MEPEQ9NQ76 525 aaPredicted RBP12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 NANSQ9NR45 359 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 MRPL39Q9NYK5 338 aaKnown RBP12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 NDUFAF4Q9P032 175 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 KCNN3Q9UGI6 736 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 NDRG3Q9UGV2 375 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 PRSS50Q9UI38 385 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 FAM32AQ9Y421 112 aaKnown RBP12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 V9GYQ6 96 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 DCHS2Q6V1P9 2916 aa12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 ANKHD1Q8IWZ3 2542 aaKnown RBP12.86□□□□□ -0.35
SQSTM1-205ENST00000464493 LOC102725191A0A1B0GVB3 256 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 MS4A18H0YCH9 400 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 ATP5HO75947 161 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 PRSS23O95084 383 aa12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 CNOT4O95628 575 aaKnown RBP12.85□□□□□ -0.35
SQSTM1-205ENST00000464493 ZNF43P17038 809 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms