RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 CLEC2LP0C7M8 214 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 TRAPPC2P0DI81 140 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 TRAPPC2BP0DI82 140 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 PRR23D2P0DMB1 279 aaPredicted RBP9.04□□□□□ -0.96
PTPRD-207ENST00000463477 PEPDP12955 493 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 SPNP16150 400 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 HK1P19367 917 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 ATP6V1E1P36543 226 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 FOLR3P41439 243 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 HSD17B7P56937 341 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 TAS2R43P59537 309 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 ACTC1P68032 377 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 ACTA1P68133 377 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 MXD1Q05195 221 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 FUT7Q11130 342 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 SELENBP1Q13228 472 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 COL9A2Q14055 689 aaPredicted RBP9.04□□□□□ -0.96
PTPRD-207ENST00000463477 LY6DQ14210 128 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 ZNF362Q5T0B9 420 aaPredicted RBP9.04□□□□□ -0.96
PTPRD-207ENST00000463477 FAM69BQ5VUD6 431 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 AGAP6Q5VW22 663 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 PLBD1Q6P4A8 553 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 ARHGAP11AQ6P4F7 1023 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 MZT2AQ6P582 158 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 RTL4Q6ZR62 310 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 SHFQ7M4L6 423 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 AKAP14Q86UN6 197 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 OR8H2Q8N162 312 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 C7orf57Q8NEG2 295 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 ATP6V1C2Q8NEY4 427 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 ACOT12Q8WYK0 555 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 CNOT9Q92600 299 aaKnown RBP9.04□□□□□ -0.96
PTPRD-207ENST00000463477 RIT1Q92963 219 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 TMEM203Q969S6 136 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 AGAP4Q96P64 663 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 SPSB2Q99619 263 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 TM9SF2Q99805 663 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 TGIF2Q9GZN2 237 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 ATP13A2Q9NQ11 1180 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 BABAM2Q9NXR7 383 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 FLRT3Q9NZU0 649 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 CLDN16Q9Y5I7 305 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 MAU2Q9Y6X3 613 aa9.04□□□□□ -0.96
PTPRD-207ENST00000463477 MPDZO75970 2070 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 NPIPA5A0A0B4J1W7 369 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 FABP12A6NFH5 140 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 C12orf71A8MTZ7 269 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 NPIPA7E9PJI5 369 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 GTPBP1O00178 669 aaKnown RBP9.03□□□□□ -0.96
PTPRD-207ENST00000463477 CLDN4O14493 209 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 RNF13O43567 381 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 PLPP2O43688 288 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 DYRK3O43781 588 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 PPM1BO75688 479 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 RGS9O75916 674 aaPredicted RBP9.03□□□□□ -0.96
PTPRD-207ENST00000463477 IFNGP01579 166 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 UMODP07911 640 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 FAM87AP0C7U9 286 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 NPIPA8P0DM63 369 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 ZNF3P17036 446 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 CELP19835 753 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 SLC6A6P31641 620 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 RPS5P46782 204 aaKnown RBP9.03□□□□□ -0.96
PTPRD-207ENST00000463477 MTNR1BP49286 362 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 GPR143P51810 404 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 ATP12AP54707 1039 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 FHL1Q13642 323 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.03□□□□□ -0.96
PTPRD-207ENST00000463477 PDZK1Q5T2W1 519 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 ULK3Q6PHR2 472 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 FAM131AQ6UXB0 335 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 THSD4Q6ZMP0 1018 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 DGAT2L6Q6ZPD8 337 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 ZAR1Q86SH2 424 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 RAB43Q86YS6 212 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 ZNF440Q8IYI8 595 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 SYT14Q8NB59 555 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 SLC37A3Q8NCC5 494 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 OR51G2Q8NGK0 314 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 NEIL3Q8TAT5 605 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 STT3BQ8TCJ2 826 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 PTP4A1Q93096 173 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 KCTD12Q96CX2 325 aaKnown RBP9.03□□□□□ -0.96
PTPRD-207ENST00000463477 MMABQ96EY8 250 aaPredicted RBP9.03□□□□□ -0.96
PTPRD-207ENST00000463477 RBM18Q96H35 190 aaKnown RBP9.03□□□□□ -0.96
PTPRD-207ENST00000463477 DIRAS2Q96HU8 199 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 TEAD3Q99594 435 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 TIMP4Q99727 224 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 ALG8Q9BVK2 526 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 IFT27Q9BW83 186 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 SLC19A3Q9BZV2 496 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 ENKD1Q9H0I2 346 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 TPK1Q9H3S4 243 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 Q9N2J8 555 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 TRIM36Q9NQ86 728 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 PRTFDC1Q9NRG1 225 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 KLHL21Q9UJP4 597 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 ADAM30Q9UKF2 790 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 ICAM5Q9UMF0 924 aa9.03□□□□□ -0.96
PTPRD-207ENST00000463477 A0A0A6YYC8 382 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms