RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 GPR143P51810 404 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 ARHGDIAP52565 204 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 IST1P53990 364 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 AQP4P55087 323 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 DCAF7P61962 342 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 PPP1R8Q12972 351 aaKnown RBP6.67□□□□□ -1.34
UBE4B-204ENST00000462658 NCF4Q15080 339 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 TAF11Q15544 211 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 NNATQ16517 81 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 NRF1Q16656 503 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 LIN52Q52LA3 116 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 CT45A2Q5DJT8 189 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 OTUD3Q5T2D3 398 aaPredicted RBP6.67□□□□□ -1.34
UBE4B-204ENST00000462658 PAPD4Q6PIY7 484 aaKnown RBP6.67□□□□□ -1.34
UBE4B-204ENST00000462658 TBPL2Q6SJ96 375 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 TIPARPQ7Z3E1 657 aaKnown RBP6.67□□□□□ -1.34
UBE4B-204ENST00000462658 TMEM179BQ7Z7N9 219 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 CYP4Z1Q86W10 505 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 HIPK1Q86Z02 1210 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 EPHX4Q8IUS5 362 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 BCORP1Q8N888 145 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 NFAM1Q8NET5 270 aaPredicted RBP6.67□□□□□ -1.34
UBE4B-204ENST00000462658 B3GNT7Q8NFL0 401 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 VANGL1Q8TAA9 524 aaPredicted RBP6.67□□□□□ -1.34
UBE4B-204ENST00000462658 APOBEC4Q8WW27 367 aaKnown RBP6.67□□□□□ -1.34
UBE4B-204ENST00000462658 ADIPOR1Q96A54 375 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 SDCCAG3Q96C92 435 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 BTBD9Q96Q07 612 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 LPAR4Q99677 370 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 PIP5K1AQ99755 562 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 SPRY4Q9C004 299 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 REEP1Q9H902 201 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 C8orf4Q9NR00 106 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 LIN7CQ9NUP9 197 aaKnown RBP6.67□□□□□ -1.34
UBE4B-204ENST00000462658 KLHL28Q9NXS3 571 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 VNN3Q9NY84 501 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 KCND3Q9UK17 655 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 SLC13A4Q9UKG4 626 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 ZNF443Q9Y2A4 671 aaPredicted RBP6.67□□□□□ -1.34
UBE4B-204ENST00000462658 SLC9A8Q9Y2E8 581 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 PTRH2Q9Y3E5 179 aaKnown RBP6.67□□□□□ -1.34
UBE4B-204ENST00000462658 ENPP4Q9Y6X5 453 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 U3KQV3 271 aa6.67□□□□□ -1.34
UBE4B-204ENST00000462658 EPG5Q9HCE0 2579 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 NPIPA5A0A0B4J1W7 369 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 FRG2CA6NGY1 282 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 CLDN24A6NM45 220 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 NPIPA7E9PJI5 369 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 TNFRSF11BO00300 401 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 PEX12O00623 359 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 EI24O14681 340 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 ADAMDEC1O15204 470 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 PRKNO60260 465 aaPredicted RBP6.66□□□□□ -1.34
UBE4B-204ENST00000462658 UGT2B17O75795 530 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 KLF7O75840 302 aaPredicted RBP6.66□□□□□ -1.34
UBE4B-204ENST00000462658 TNFSF15O95150 251 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 UMODP07911 640 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 RAB40ALP0C0E4 278 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 RFPL3SP0C7P2 107 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 NPIPA8P0DM63 369 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 CEACAM1P13688 526 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 ACADSP16219 412 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 TCN2P20062 427 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 RPS4Y1P22090 263 aaKnown RBP6.66□□□□□ -1.34
UBE4B-204ENST00000462658 PRKACGP22612 351 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 RRM2P31350 389 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 HSPA13P48723 471 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 ATP12AP54707 1039 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 EEF1A1P68104 462 aaKnown RBP6.66□□□□□ -1.34
UBE4B-204ENST00000462658 SPIBQ01892 262 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 TLE3Q04726 772 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 EBPQ15125 230 aaKnown RBP6.66□□□□□ -1.34
UBE4B-204ENST00000462658 MAPK14Q16539 360 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 SRSF7Q16629 238 aaKnown RBP eCLIP6.66□□□□□ -1.34
UBE4B-204ENST00000462658 DECR1Q16698 335 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 EIPR1Q53HC9 387 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 FAM69BQ5VUD6 431 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 SHQ1Q6PI26 577 aaKnown RBP6.66□□□□□ -1.34
UBE4B-204ENST00000462658 HSDL2Q6YN16 418 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 DEF8Q6ZN54 512 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 ZNF836Q6ZNA1 936 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 COMTD1Q86VU5 262 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 TMPRSS12Q86WS5 348 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 RBM45Q8IUH3 476 aaKnown RBP6.66□□□□□ -1.34
UBE4B-204ENST00000462658 LACC1Q8IV20 430 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 C9orf40Q8IXQ3 194 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 CLIP4Q8N3C7 705 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 GALNT15Q8N3T1 639 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 OR4D11Q8NGI4 311 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 OR6T1Q8NGN1 323 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 OR2Y1Q8NGV0 311 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 MAGEE2Q8TD90 523 aaPredicted RBP6.66□□□□□ -1.34
UBE4B-204ENST00000462658 C8orf44Q96CB5 159 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 NRBF2Q96F24 287 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 ZNF597Q96LX8 424 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 GAL3ST4Q96RP7 486 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 EPYCQ99645 322 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 ARHGDIGQ99819 225 aa6.66□□□□□ -1.34
UBE4B-204ENST00000462658 WDR77Q9BQA1 342 aaPredicted RBP6.66□□□□□ -1.34
UBE4B-204ENST00000462658 WFDC6Q9BQY6 131 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms