RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 WWOXQ9NZC7 414 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 CLCF1Q9UBD9 225 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 ZNF580Q9UK33 172 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 CCL27Q9Y4X3 112 aa4.2□□□□□ -1.74
COPS3-204ENST00000462236 IGLV5-45A0A087WSX0 123 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 FRG2CA6NGY1 282 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 H3BMM5 538 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 CASKO14936 926 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 BUB3O43684 328 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 SPOPO43791 374 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 OR10H2O60403 315 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 TBX6O95947 436 aaPredicted RBP4.19□□□□□ -1.74
COPS3-204ENST00000462236 BCL10O95999 233 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 CGAP01215 116 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 IGKV3-11P04433 115 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 DANCRP0C864 163 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 CPN1P15169 458 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 CTNNA2P26232 953 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 SLC6A6P31641 620 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 SLC9A3P48764 834 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 TRPC1P48995 793 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 CDK9P50750 372 aaKnown RBP4.19□□□□□ -1.74
COPS3-204ENST00000462236 ZNF75DP51815 510 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 RAB38P57729 211 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 SKP1P63208 163 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 IGLV3-21P80748 117 aaPredicted RBP4.19□□□□□ -1.74
COPS3-204ENST00000462236 TSTA3Q13630 321 aaPredicted RBP4.19□□□□□ -1.74
COPS3-204ENST00000462236 ADAM5Q6NVV9 412 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 TEX38Q6PEX7 206 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 HSDL2Q6YN16 418 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 SH2D5Q6ZV89 423 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 KCTD8Q6ZWB6 473 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 PIWIL4Q7Z3Z4 852 aaKnown RBP4.19□□□□□ -1.74
COPS3-204ENST00000462236 LUZP2Q86TE4 346 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 C17orf64Q86WR6 236 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 MEX3DQ86XN8 651 aaKnown RBP4.19□□□□□ -1.74
COPS3-204ENST00000462236 CCDC50Q8IVM0 306 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 ZNF595Q8IYB9 648 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 PRELID2Q8N945 189 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 MORN4Q8NDC4 146 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 RBM15BQ8NDT2 890 aaKnown RBP4.19□□□□□ -1.74
COPS3-204ENST00000462236 SKA2Q8WVK7 121 aaPredicted RBP4.19□□□□□ -1.74
COPS3-204ENST00000462236 ANKRD9Q96BM1 317 aaPredicted RBP4.19□□□□□ -1.74
COPS3-204ENST00000462236 LRRC45Q96CN5 670 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 STARD4Q96DR4 205 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 ZBED6CLQ96FA7 236 aaPredicted RBP4.19□□□□□ -1.74
COPS3-204ENST00000462236 PIK3IP1Q96FE7 263 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 SGK494Q96LW2 274 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 ALS2CR12Q96Q35 445 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 OR4K3Q96R72 315 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 LMF2Q9BU23 707 aaKnown RBP4.19□□□□□ -1.74
COPS3-204ENST00000462236 OSBPL8Q9BZF1 889 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 EXO5Q9H790 373 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 TCF7L2Q9NQB0 619 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 CCDC177Q9NQR7 707 aaPredicted RBP4.19□□□□□ -1.74
COPS3-204ENST00000462236 PNO1Q9NRX1 252 aaKnown RBP4.19□□□□□ -1.74
COPS3-204ENST00000462236 FAM118AQ9NWS6 357 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 CNIH4Q9P003 139 aa4.19□□□□□ -1.74
COPS3-204ENST00000462236 BOKQ9UMX3 212 aaPredicted RBP4.19□□□□□ -1.74
COPS3-204ENST00000462236 DNAH3Q8TD57 4116 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 C15orf38-AP3S2A0A0A6YYH1 394 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 A0A1W2PNV4 684 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 SERINC4A6NH21 518 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 GPRIN2O60269 458 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 CTNSO60931 367 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 ETHE1O95571 254 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 CRHP06850 196 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 LIPFP07098 398 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 SERPINA6P08185 405 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 OR2T7P0C7T2 308 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 HOXB6P17509 224 aaKnown RBP4.18□□□□□ -1.74
COPS3-204ENST00000462236 OGNP20774 298 aaKnown RBP4.18□□□□□ -1.74
COPS3-204ENST00000462236 CBLP22681 906 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 CTNNA1P35221 906 aaKnown RBP4.18□□□□□ -1.74
COPS3-204ENST00000462236 UGT2B10P36537 528 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 CD79BP40259 229 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 NAGLUP54802 743 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 MTTPP55157 894 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 VLDLRP98155 873 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 REEP5Q00765 189 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 FUT7Q11130 342 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 HSPB3Q12988 150 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 PLA2G7Q13093 441 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 VEZF1Q14119 521 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 GUSBP1Q15486 140 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 TMEM249Q2WGJ8 235 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 ADPRMQ3LIE5 342 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 PDLIM3Q53GG5 364 aaPredicted RBP4.18□□□□□ -1.74
COPS3-204ENST00000462236 EIPR1Q53HC9 387 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 ODF2Q5BJF6 829 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 GRTP1Q5TC63 336 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 PRAMEF20Q5VT98 475 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 CST9LP1Q5W188 147 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 C11orf63Q6NUN7 778 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 RAD9BQ6WBX8 426 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 MBOAT1Q6ZNC8 495 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 RBPMS2Q6ZRY4 209 aaKnown RBP4.18□□□□□ -1.74
COPS3-204ENST00000462236 CENPUQ71F23 418 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 C9orf40Q8IXQ3 194 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 DND1Q8IYX4 353 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms