RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 EXT1Q16394 746 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 BTBD16Q32M84 506 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 FLYWCH1Q4VC44 716 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 CT83Q5H943 113 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 SPINK14Q6IE38 97 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 SLC48A1Q6P1K1 146 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 PAPD4Q6PIY7 484 aaKnown RBP5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 SHISA2Q6UWI4 295 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 LARP4Q71RC2 724 aaKnown RBP eCLIP5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 GALNTL5Q7Z4T8 443 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 SPATA19Q7Z5L4 167 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 HIPK1Q86Z02 1210 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 AQP12AQ8IXF9 295 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 LRRC75A-AS1Q8N1F1 130 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 CLIP4Q8N3C7 705 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 PAPD5Q8NDF8 572 aaKnown RBP5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 MDS2Q8NDY4 140 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 OR8H1Q8NGG4 311 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 OR13F1Q8NGS4 319 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 CLHC1Q8NHS4 586 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 FAM222BQ8WU58 562 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 FIG4Q92562 907 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 RIT1Q92963 219 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 PTP4A1Q93096 173 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 YIPF5Q969M3 257 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 TESCQ96BS2 214 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 PPCDCQ96CD2 204 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 RCN3Q96D15 328 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 SH3YL1Q96HL8 342 aaPredicted RBP5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 RAX2Q96IS3 184 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 FCRL1Q96LA6 429 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 TMEM68Q96MH6 324 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 DGAT2Q96PD7 388 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 PLA2G12AQ9BZM1 189 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 WNT5BQ9H1J7 359 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 NANOGQ9H9S0 305 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 ADAP2Q9NPF8 381 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 IFT46Q9NQC8 304 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 PCDHB16Q9NRJ7 776 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 DDX28Q9NUL7 540 aaKnown RBP5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 ACOXLQ9NUZ1 547 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 ERVK13-1Q9NX77 482 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 ANKRD10Q9NXR5 420 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 SH3BP4Q9P0V3 963 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 TMEM181Q9P2C4 612 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 CYB5R1Q9UHQ9 305 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 ZNF639Q9UID6 485 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 DYSFO75923 2080 aa5.44□□□□□ -1.54
SMARCC1-204ENST00000462198 NBEAL2Q6ZNJ1 2754 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 PRORSD1PA6NEY8 169 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 TUBAL3A6NHL2 446 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 A8MVJ9 347 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 H0YAE9 185 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 J3QRK9 145 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 SYT5O00445 386 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 TFECO14948 347 aaPredicted RBP5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 SCAMP2O15127 329 aaKnown RBP5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 UBDO15205 165 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 SMPD2O60906 423 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 SP1P08047 785 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 CLEC2LP0C7M8 214 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 SLC35E2P0CK97 266 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 HSMCR30P0CW71 290 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 G6PDP11413 515 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 PRPS1L1P21108 318 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 NT5EP21589 574 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 NR4A1P22736 598 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 CHMP24386 653 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 UQCRC1P31930 480 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 MPIP34949 423 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 RPL3P39023 403 aaKnown RBP5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 HTR2BP41595 481 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 HLCSP50747 726 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 DIO3P55073 304 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 CDH15P55291 814 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 CLDN8P56748 225 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 SLC26A5P58743 744 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 PSME3P61289 254 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 IGLV3-21P80748 117 aaPredicted RBP5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 STX5Q13190 355 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 PMS2P3Q13401 168 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 COTL1Q14019 142 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 PTGR1Q14914 329 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 RAB39AQ14964 217 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 MFSD13AQ14CX5 517 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 OR1C1Q15619 314 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 TAB1Q15750 504 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 ATP6AP1Q15904 470 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 MAPKAPK3Q16644 382 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 ZNF750Q32MQ0 723 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 GTDC1Q4AE62 458 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 EMC4Q5J8M3 183 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 FGD3Q5JSP0 725 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 SAMD4BQ5PRF9 694 aaKnown RBP5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 UBE2UQ5VVX9 321 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 TIGD3Q6B0B8 471 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 PLAG1Q6DJT9 500 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 FAM71E1Q6IPT2 247 aa5.43□□□□□ -1.54
SMARCC1-204ENST00000462198 R3HCC1LQ7Z5L2 792 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms