RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 HSPA12BQ96MM6 686 aa16.92■□□□□ 0.3
HPS3-204ENST00000462030 OR2A7Q96R45 310 aa16.92■□□□□ 0.3
HPS3-204ENST00000462030 NMNAT3Q96T66 252 aa16.92■□□□□ 0.3
HPS3-204ENST00000462030 RABL2AQ9UBK7 228 aaPredicted RBP16.92■□□□□ 0.3
HPS3-204ENST00000462030 RABL2BQ9UNT1 228 aa16.92■□□□□ 0.3
HPS3-204ENST00000462030 SLC22A7Q9Y694 548 aa16.92■□□□□ 0.3
HPS3-204ENST00000462030 V9GY05 133 aa16.92■□□□□ 0.3
HPS3-204ENST00000462030 SPTBP11277 2137 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 OR6C65A6NJZ3 312 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 ATP6V1G2-DDX39BF2Z307 99 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 LGALS8O00214 317 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 PDCD5O14737 125 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 ARPC5O15511 151 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 SERPINI2O75830 405 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 TSPAN9O75954 239 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 SIX6O95475 246 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 CD1AP06126 327 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 TMIGD3P0DMS9 266 aaPredicted RBP16.91■□□□□ 0.3
HPS3-204ENST00000462030 ARSKQ6UWY0 536 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 PRSS41Q7RTY9 318 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 S100A16Q96FQ6 103 aaKnown RBP16.91■□□□□ 0.3
HPS3-204ENST00000462030 SEMA4CQ9C0C4 833 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 MRPS2Q9Y399 296 aaKnown RBP16.91■□□□□ 0.3
HPS3-204ENST00000462030 CDH23Q9H251 3354 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 A0A1B0GVT2 93 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 B3GALT2O43825 422 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 GPRIN2O60269 458 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 CTSVO60911 334 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 NDUFB6O95139 128 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 ZFPL1O95159 310 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 SMIM10L1P0DMW3 83 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 TLX1P31314 330 aaPredicted RBP16.91■□□□□ 0.3
HPS3-204ENST00000462030 STX4Q12846 297 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 PON3Q15166 354 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 CSRP2Q16527 193 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 C2orf68Q2NKX9 166 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 SMIM10Q96HG1 83 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 TMPRSS13Q9BYE2 586 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 SHARPINQ9H0F6 387 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 CD93Q9NPY3 652 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 SLC17A4Q9Y2C5 497 aa16.91■□□□□ 0.3
HPS3-204ENST00000462030 PYCARD-AS1I3L0S3 204 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 NDUFB2O95178 105 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 VSIG10L2P0DP72 767 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 ACAA2P42765 397 aaKnown RBP16.9■□□□□ 0.3
HPS3-204ENST00000462030 DIO1P49895 249 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 CST6Q15828 149 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 EID2Q8N6I1 236 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 OR5M1Q8NGP8 315 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 ZNF707Q96C28 371 aaPredicted RBP16.9■□□□□ 0.3
HPS3-204ENST00000462030 SIPA1Q96FS4 1042 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 STACQ99469 402 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 KIR3DX1Q9H7L2 352 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 GPN1Q9HCN4 374 aaPredicted RBP16.9■□□□□ 0.3
HPS3-204ENST00000462030 ZNF281Q9Y2X9 895 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 ENTPD2Q9Y5L3 495 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 TCRBV16S1A1N1A0A5B0 115 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 SLC22A23A1A5C7 686 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 FAM171A2A8MVW0 826 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 TAS2R20P59543 309 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 PLA2G7Q13093 441 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 CBFBQ13951 182 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 FAM122CQ6P4D5 195 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 RNF166Q96A37 237 aaPredicted RBP16.9■□□□□ 0.3
HPS3-204ENST00000462030 HAVCR1Q96D42 359 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 OR2A5Q96R48 311 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 DMRTA2Q96SC8 542 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 GINS4Q9BRT9 223 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 UTP23Q9BRU9 249 aaKnown RBP16.9■□□□□ 0.3
HPS3-204ENST00000462030 SESN1Q9Y6P5 492 aa16.9■□□□□ 0.3
HPS3-204ENST00000462030 ATG2BQ96BY7 2078 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 OR6C68A6NDL8 312 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 SULT1B1O43704 296 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 GNRH1P01148 92 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 SPI1P17947 270 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 S100A11P31949 105 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 MNX1P50219 401 aaPredicted RBP16.89■□□□□ 0.29
HPS3-204ENST00000462030 UBE2MP61081 183 aaKnown RBP16.89■□□□□ 0.29
HPS3-204ENST00000462030 SEC61A1P61619 476 aaKnown RBP16.89■□□□□ 0.29
HPS3-204ENST00000462030 OVCH2Q7RTZ1 564 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 NPEPL1Q8NDH3 523 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 DNAAF1Q8NEP3 725 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 PHYHIPQ92561 330 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 ZNF578Q96N58 590 aaPredicted RBP16.89■□□□□ 0.29
HPS3-204ENST00000462030 THAP10Q9P2Z0 257 aaPredicted RBP16.89■□□□□ 0.29
HPS3-204ENST00000462030 ZNF346Q9UL40 294 aaKnown RBP16.89■□□□□ 0.29
HPS3-204ENST00000462030 TRBV23OR9-2A0A075B6M9 112 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 C4orf47A7E2U8 309 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 SNRPGP15A8MWD9 76 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 B3GALNT1O75752 331 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 HIST1H2ABP04908 130 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 IL5P05113 134 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 IGFALSP35858 605 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 RPL4P36578 427 aaKnown RBP16.89■□□□□ 0.29
HPS3-204ENST00000462030 MAP3K8P41279 467 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 H2BFSP57053 126 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 PRICKLE4Q2TBC4 344 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 TMUB2Q71RG4 321 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 HIST3H2AQ7L7L0 130 aa16.89■□□□□ 0.29
HPS3-204ENST00000462030 OR5T3Q8NGG3 340 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms