RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 PIP5K1AQ99755 562 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 SF3B5Q9BWJ5 86 aaKnown RBP13.59□□□□□ -0.23
VARS-219ENST00000461328 NGBQ9NPG2 151 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 ASB6Q9NWX5 421 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 MAP1AP78559 2803 aaPredicted RBP13.58□□□□□ -0.24
VARS-219ENST00000461328 TRAV36DV7A0A075B6V5 113 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 A0A0B4J2E0 115 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 A0A1B0GX12 115 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 CPSF4LA6NMK7 179 aaKnown RBP13.58□□□□□ -0.24
VARS-219ENST00000461328 FAM220BPB1ANY3 271 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 OR2T1O43869 369 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 RAD51DO75771 328 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 KRT33AO76009 404 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 LGI1O95970 557 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 C8BP07358 591 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 GGT1P19440 569 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 CBLP22681 906 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 GZMMP51124 257 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 GNGT1P63211 74 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 NRF1Q16656 503 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 LRRC23Q53EV4 343 aaPredicted RBP13.58□□□□□ -0.24
VARS-219ENST00000461328 FAM69AQ5T7M9 428 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 CALHM3Q86XJ0 350 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 WFDC11Q8NEX6 87 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 OR2T12Q8NG77 320 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 OR6T1Q8NGN1 323 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 WFDC6Q9BQY6 131 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 PTDSS2Q9BVG9 487 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 USP22Q9UPT9 525 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 RASD1Q9Y272 281 aa13.58□□□□□ -0.24
VARS-219ENST00000461328 ARHGEF9O43307 516 aa13.57□□□□□ -0.24
VARS-219ENST00000461328 FMO6PO60774 539 aa13.57□□□□□ -0.24
VARS-219ENST00000461328 VAMP5O95183 116 aa13.57□□□□□ -0.24
VARS-219ENST00000461328 PLAUP00749 431 aa13.57□□□□□ -0.24
VARS-219ENST00000461328 IFNA14P01570 189 aa13.57□□□□□ -0.24
VARS-219ENST00000461328 COX5AP20674 150 aa13.57□□□□□ -0.24
VARS-219ENST00000461328 CD247P20963 164 aa13.57□□□□□ -0.24
VARS-219ENST00000461328 HOXC12P31275 282 aa13.57□□□□□ -0.24
VARS-219ENST00000461328 NUDT2P50583 147 aa13.57□□□□□ -0.24
VARS-219ENST00000461328 GYS2P54840 703 aa13.57□□□□□ -0.24
VARS-219ENST00000461328 CDH12P55289 794 aa13.57□□□□□ -0.24
VARS-219ENST00000461328 EGR4Q05215 589 aa13.57□□□□□ -0.24
VARS-219ENST00000461328 SWT1Q5T5J6 900 aaKnown RBP13.57□□□□□ -0.24
VARS-219ENST00000461328 C9orf135Q5VTT2 229 aa13.57□□□□□ -0.24
VARS-219ENST00000461328 SHEQ5VZ18 495 aa13.57□□□□□ -0.24
VARS-219ENST00000461328 ZNF613Q6PF04 617 aa13.57□□□□□ -0.24
VARS-219ENST00000461328 TMEM45BQ96B21 275 aa13.57□□□□□ -0.24
VARS-219ENST00000461328 MUCL1Q96DR8 90 aa13.57□□□□□ -0.24
VARS-219ENST00000461328 ZNF385AQ96PM9 386 aaKnown RBP13.57□□□□□ -0.24
VARS-219ENST00000461328 ESRP2Q9H6T0 727 aaKnown RBP13.57□□□□□ -0.24
VARS-219ENST00000461328 TAS2R16Q9NYV7 291 aa13.57□□□□□ -0.24
VARS-219ENST00000461328 MALT1Q9UDY8 824 aa13.57□□□□□ -0.24
VARS-219ENST00000461328 BAG5Q9UL15 447 aa13.57□□□□□ -0.24
VARS-219ENST00000461328 AP3M1Q9Y2T2 418 aa13.57□□□□□ -0.24
VARS-219ENST00000461328 IGKV1D-42A0A075B6H8 117 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 A0A087WUJ7 227 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 GMNCA6NCL1 334 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 FTCDNL1E5RQL4 147 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 M0R082 166 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 CLOCKO15516 846 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 TPST2O60704 377 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 CD3EP07766 207 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 NQO1P15559 274 aaKnown RBP13.56□□□□□ -0.24
VARS-219ENST00000461328 DRD4P21917 467 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 GRPRP30550 384 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 NTF4P34130 210 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 C1DQ13901 141 aaKnown RBP13.56□□□□□ -0.24
VARS-219ENST00000461328 VEZF1Q14119 521 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 PPA1Q15181 289 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 ENTPD8Q5MY95 495 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 DEF8Q6ZN54 512 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 CCDC80Q76M96 950 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 RBM45Q8IUH3 476 aaKnown RBP13.56□□□□□ -0.24
VARS-219ENST00000461328 MICU2Q8IYU8 434 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 LRRC75A-AS1Q8N1F1 130 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 ZNF433Q8N7K0 673 aaPredicted RBP13.56□□□□□ -0.24
VARS-219ENST00000461328 ZNF417Q8TAU3 575 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 AKAP1Q92667 903 aaKnown RBP eCLIP13.56□□□□□ -0.24
VARS-219ENST00000461328 TAAR8Q969N4 342 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 ZNF583Q96ND8 569 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 ZNF587Q96SQ5 575 aaPredicted RBP13.56□□□□□ -0.24
VARS-219ENST00000461328 TMEM204Q9BSN7 226 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 ASPNQ9BXN1 380 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 SLCO5A1Q9H2Y9 848 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 EFCAB1Q9HAE3 211 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 SEC14L4Q9UDX3 406 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 SH3GLB1Q9Y371 365 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 RNF115Q9Y4L5 304 aa13.56□□□□□ -0.24
VARS-219ENST00000461328 FREM1Q5H8C1 2179 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 ELOVL7A1L3X0 281 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 TRAPPC13A5PLN9 417 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 HS3ST1O14792 307 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 GSTA4O15217 222 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 CHP2O43745 196 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 SNX3O60493 162 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 ZNF43P17038 809 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 P2RY4P51582 365 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 SLC7A2P52569 658 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 TGFBR3Q03167 851 aa13.55□□□□□ -0.24
VARS-219ENST00000461328 MFSD13AQ14CX5 517 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms