RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 C17orf78Q8N4C9 275 aa16.62■□□□□ 0.25
COL5A1-203ENST00000460264 POMGNT2Q8NAT1 580 aa16.62■□□□□ 0.25
COL5A1-203ENST00000460264 C11orf65Q8NCR3 313 aa16.62■□□□□ 0.25
COL5A1-203ENST00000460264 SMAP2Q8WU79 429 aaPredicted RBP16.62■□□□□ 0.25
COL5A1-203ENST00000460264 PRR14Q9BWN1 585 aa16.62■□□□□ 0.25
COL5A1-203ENST00000460264 TESQ9UGI8 421 aaKnown RBP16.62■□□□□ 0.25
COL5A1-203ENST00000460264 RASD1Q9Y272 281 aa16.62■□□□□ 0.25
COL5A1-203ENST00000460264 H7C1Q1 480 aa16.61■□□□□ 0.25
COL5A1-203ENST00000460264 OVOL3O00110 214 aa16.61■□□□□ 0.25
COL5A1-203ENST00000460264 SERPINB7O75635 380 aa16.61■□□□□ 0.25
COL5A1-203ENST00000460264 PNMTP11086 282 aa16.61■□□□□ 0.25
COL5A1-203ENST00000460264 MPGP29372 298 aa16.61■□□□□ 0.25
COL5A1-203ENST00000460264 ZNF83P51522 516 aa16.61■□□□□ 0.25
COL5A1-203ENST00000460264 CDH11P55287 796 aa16.61■□□□□ 0.25
COL5A1-203ENST00000460264 ATP5J2P56134 94 aa16.61■□□□□ 0.25
COL5A1-203ENST00000460264 PCBP3P57721 371 aaKnown RBP16.61■□□□□ 0.25
COL5A1-203ENST00000460264 RGS8P57771 180 aaPredicted RBP16.61■□□□□ 0.25
COL5A1-203ENST00000460264 NCALDP61601 193 aa16.61■□□□□ 0.25
COL5A1-203ENST00000460264 TGFBR3Q03167 851 aa16.61■□□□□ 0.25
COL5A1-203ENST00000460264 DMTNQ08495 405 aa16.61■□□□□ 0.25
COL5A1-203ENST00000460264 CYP51A1Q16850 503 aa16.61■□□□□ 0.25
COL5A1-203ENST00000460264 PGGHGQ32M88 737 aa16.61■□□□□ 0.25
COL5A1-203ENST00000460264 ALG10BQ5I7T1 473 aa16.61■□□□□ 0.25
COL5A1-203ENST00000460264 KLHL17Q6TDP4 642 aa16.61■□□□□ 0.25
COL5A1-203ENST00000460264 TMEM108Q6UXF1 575 aa16.61■□□□□ 0.25
COL5A1-203ENST00000460264 ARMC8Q8IUR7 673 aa16.61■□□□□ 0.25
COL5A1-203ENST00000460264 CIARTQ8N365 385 aaPredicted RBP16.61■□□□□ 0.25
COL5A1-203ENST00000460264 WDR31Q8NA23 367 aa16.61■□□□□ 0.25
COL5A1-203ENST00000460264 BHLHE22Q8NFJ8 381 aaPredicted RBP16.61■□□□□ 0.25
COL5A1-203ENST00000460264 DNAJA4Q8WW22 397 aaPredicted RBP16.61■□□□□ 0.25
COL5A1-203ENST00000460264 SLC25A36Q96CQ1 311 aa16.61■□□□□ 0.25
COL5A1-203ENST00000460264 SLC17A5Q9NRA2 495 aa16.61■□□□□ 0.25
COL5A1-203ENST00000460264 MAGED1Q9Y5V3 778 aaPredicted RBP16.61■□□□□ 0.25
COL5A1-203ENST00000460264 HEATR1Q9H583 2144 aaKnown RBP16.61■□□□□ 0.25
COL5A1-203ENST00000460264 IGKV1D-42A0A075B6H8 117 aa16.6■□□□□ 0.25
COL5A1-203ENST00000460264 TRIM64A6NGJ6 449 aa16.6■□□□□ 0.25
COL5A1-203ENST00000460264 TRIM64BA6NI03 449 aa16.6■□□□□ 0.25
COL5A1-203ENST00000460264 MFN2O95140 757 aa16.6■□□□□ 0.25
COL5A1-203ENST00000460264 GTF2E2P29084 291 aaKnown RBP16.6■□□□□ 0.25
COL5A1-203ENST00000460264 SELENOPP49908 381 aa16.6■□□□□ 0.25
COL5A1-203ENST00000460264 SLC25A3Q00325 362 aa16.6■□□□□ 0.25
COL5A1-203ENST00000460264 SPOCK1Q08629 439 aa16.6■□□□□ 0.25
COL5A1-203ENST00000460264 RBBP4Q09028 425 aa16.6■□□□□ 0.25
COL5A1-203ENST00000460264 NFYCQ13952 458 aa16.6■□□□□ 0.25
COL5A1-203ENST00000460264 FAM91A1Q658Y4 838 aa16.6■□□□□ 0.25
COL5A1-203ENST00000460264 ULK3Q6PHR2 472 aa16.6■□□□□ 0.25
COL5A1-203ENST00000460264 C5orf46Q6UWT4 87 aa16.6■□□□□ 0.25
COL5A1-203ENST00000460264 EPHX4Q8IUS5 362 aa16.6■□□□□ 0.25
COL5A1-203ENST00000460264 RADILQ96JH8 1075 aa16.6■□□□□ 0.25
COL5A1-203ENST00000460264 WFDC6Q9BQY6 131 aa16.6■□□□□ 0.25
COL5A1-203ENST00000460264 BDH2Q9BUT1 245 aa16.6■□□□□ 0.25
COL5A1-203ENST00000460264 TMEM120AQ9BXJ8 343 aa16.6■□□□□ 0.25
COL5A1-203ENST00000460264 ZNF446Q9NWS9 450 aa16.6■□□□□ 0.25
COL5A1-203ENST00000460264 CISD1Q9NZ45 108 aaKnown RBP16.6■□□□□ 0.25
COL5A1-203ENST00000460264 SEC14L4Q9UDX3 406 aa16.6■□□□□ 0.25
COL5A1-203ENST00000460264 SLC13A4Q9UKG4 626 aa16.6■□□□□ 0.25
COL5A1-203ENST00000460264 TLN2Q9Y4G6 2542 aa16.59■□□□□ 0.25
COL5A1-203ENST00000460264 PTAFRP25105 342 aa16.59■□□□□ 0.25
COL5A1-203ENST00000460264 CD40P25942 277 aa16.59■□□□□ 0.25
COL5A1-203ENST00000460264 LGALS3BPQ08380 585 aa16.59■□□□□ 0.25
COL5A1-203ENST00000460264 FAM69AQ5T7M9 428 aa16.59■□□□□ 0.25
COL5A1-203ENST00000460264 ABHD12BQ7Z5M8 362 aaPredicted RBP16.59■□□□□ 0.25
COL5A1-203ENST00000460264 NET1Q7Z628 596 aaPredicted RBP16.59■□□□□ 0.25
COL5A1-203ENST00000460264 PIAS4Q8N2W9 510 aaPredicted RBP16.59■□□□□ 0.25
COL5A1-203ENST00000460264 KDM8Q8N371 416 aa16.59■□□□□ 0.25
COL5A1-203ENST00000460264 SLC38A4Q969I6 547 aa16.59■□□□□ 0.25
COL5A1-203ENST00000460264 TAAR8Q969N4 342 aa16.59■□□□□ 0.25
COL5A1-203ENST00000460264 POM121Q96HA1 1249 aa16.59■□□□□ 0.25
COL5A1-203ENST00000460264 ALKBH3Q96Q83 286 aaPredicted RBP16.59■□□□□ 0.25
COL5A1-203ENST00000460264 KAT8Q9H7Z6 458 aaKnown RBP16.59■□□□□ 0.25
COL5A1-203ENST00000460264 EVA1AQ9H8M9 152 aa16.59■□□□□ 0.25
COL5A1-203ENST00000460264 FGFR1OP2Q9NVK5 253 aa16.59■□□□□ 0.25
COL5A1-203ENST00000460264 B3GAT1Q9P2W7 334 aa16.59■□□□□ 0.25
COL5A1-203ENST00000460264 MGAT4BQ9UQ53 548 aa16.59■□□□□ 0.25
COL5A1-203ENST00000460264 AMDHD2Q9Y303 409 aa16.59■□□□□ 0.25
COL5A1-203ENST00000460264 NAV3Q8IVL0 2385 aa16.59■□□□□ 0.25
COL5A1-203ENST00000460264 TRAV36DV7A0A075B6V5 113 aa16.58■□□□□ 0.24
COL5A1-203ENST00000460264 A0A0B4J2E0 115 aa16.58■□□□□ 0.24
COL5A1-203ENST00000460264 A0A1B0GX12 115 aa16.58■□□□□ 0.24
COL5A1-203ENST00000460264 M0R082 166 aa16.58■□□□□ 0.24
COL5A1-203ENST00000460264 M0R1B8 84 aa16.58■□□□□ 0.24
COL5A1-203ENST00000460264 FBP2O00757 339 aa16.58■□□□□ 0.24
COL5A1-203ENST00000460264 OR2T1O43869 369 aa16.58■□□□□ 0.24
COL5A1-203ENST00000460264 TPST2O60704 377 aa16.58■□□□□ 0.24
COL5A1-203ENST00000460264 OPN1SWP03999 348 aa16.58■□□□□ 0.24
COL5A1-203ENST00000460264 CDH2P19022 906 aaPredicted RBP16.58■□□□□ 0.24
COL5A1-203ENST00000460264 C1QTNF12Q5T7M4 302 aa16.58■□□□□ 0.24
COL5A1-203ENST00000460264 NIPAL3Q6P499 406 aa16.58■□□□□ 0.24
COL5A1-203ENST00000460264 DTX2Q86UW9 622 aa16.58■□□□□ 0.24
COL5A1-203ENST00000460264 RANBP3LQ86VV4 465 aaPredicted RBP16.58■□□□□ 0.24
COL5A1-203ENST00000460264 SMYD1Q8NB12 490 aa16.58■□□□□ 0.24
COL5A1-203ENST00000460264 ZNF417Q8TAU3 575 aa16.58■□□□□ 0.24
COL5A1-203ENST00000460264 GTPBP3Q969Y2 492 aaKnown RBP16.58■□□□□ 0.24
COL5A1-203ENST00000460264 SLC47A1Q96FL8 570 aa16.58■□□□□ 0.24
COL5A1-203ENST00000460264 BOD1Q96IK1 185 aa16.58■□□□□ 0.24
COL5A1-203ENST00000460264 ZNF587Q96SQ5 575 aaPredicted RBP16.58■□□□□ 0.24
COL5A1-203ENST00000460264 TRAF4Q9BUZ4 470 aaPredicted RBP16.58■□□□□ 0.24
COL5A1-203ENST00000460264 C1QTNF6Q9BXI9 259 aa16.58■□□□□ 0.24
COL5A1-203ENST00000460264 TMEM27Q9HBJ8 222 aa16.58■□□□□ 0.24
COL5A1-203ENST00000460264 FAIMQ9NVQ4 179 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms