RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 ZMAT1Q5H9K5 638 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 ARL14Q8N4G2 192 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 PFN4Q8NHR9 129 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 DUSP19Q8WTR2 217 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 GIMAP1Q8WWP7 306 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 YIPF6Q96EC8 236 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 TEAD3Q99594 435 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 PTTG3PQ9NZH4 202 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 H0Y8X5 98 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 SUSD5O60279 629 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 FCMRO60667 390 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 OPN1LWP04000 364 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 HLA-DMAP28067 261 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 CSNK1A1P48729 337 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 TAS2R31P59538 309 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 RRAS2P62070 204 aaPredicted RBP13.66□□□□□ -0.22
PTPRU-205ENST00000460170 CDKN3Q16667 212 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 PAQR6Q6TCH4 344 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 ARSKQ6UWY0 536 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 ZNF620Q6ZNG0 422 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 LRRC69Q6ZNQ3 347 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 GTPBP8Q8N3Z3 284 aaPredicted RBP13.66□□□□□ -0.22
PTPRU-205ENST00000460170 CD300LFQ8TDQ1 290 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 ZFPM2Q8WW38 1151 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 PHYHIPQ92561 330 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 ALG14Q96F25 216 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 SNX18Q96RF0 628 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 HCAR1Q9BXC0 346 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 PLEK2Q9NYT0 353 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 NPFFR2Q9Y5X5 522 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 AQP6Q13520 282 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 DUSP6Q16828 381 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 CHRDL2Q6WN34 429 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 ZNF511Q8NB15 262 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 OR7G2Q8NG99 324 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 SLC2A12Q8TD20 617 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 SFXN2Q96NB2 322 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 SYT3Q9BQG1 590 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 TMEFF2Q9UIK5 374 aaPredicted RBP13.65□□□□□ -0.22
PTPRU-205ENST00000460170 SLC6A14Q9UN76 642 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 OR5K3A6NET4 321 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 OR7A10O76100 309 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 POLR2HP52434 150 aaKnown RBP13.65□□□□□ -0.22
PTPRU-205ENST00000460170 ELP2Q6IA86 826 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 TMPPEQ6ZT21 453 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 NDUFAF7Q7L592 441 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 EID2BQ96D98 161 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 MRPL38Q96DV4 380 aaKnown RBP13.65□□□□□ -0.22
PTPRU-205ENST00000460170 SLC41A2Q96JW4 573 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 RHNO1Q9BSD3 238 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 DUSP23Q9BVJ7 150 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 SPNS1Q9H2V7 528 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 NOX4Q9NPH5 578 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 NDUFB11Q9NX14 153 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 KNG1P01042 644 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 SERPINA5P05154 406 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 HYAL4Q2M3T9 481 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 TSSK4Q6SA08 328 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 C12orf45Q8N5I9 185 aaPredicted RBP13.65□□□□□ -0.22
PTPRU-205ENST00000460170 OR2A1Q8NGT9 310 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 WDR76Q9H967 626 aa13.65□□□□□ -0.22
PTPRU-205ENST00000460170 HINT3Q9NQE9 182 aaKnown RBP13.65□□□□□ -0.22
PTPRU-205ENST00000460170 DHCR7Q9UBM7 475 aaKnown RBP13.65□□□□□ -0.22
PTPRU-205ENST00000460170 UBE2J1Q9Y385 318 aaPredicted RBP13.65□□□□□ -0.22
PTPRU-205ENST00000460170 PTRH2Q9Y3E5 179 aaKnown RBP13.65□□□□□ -0.22
PTPRU-205ENST00000460170 TRAV36DV7A0A075B6V5 113 aa13.65□□□□□ -0.23
PTPRU-205ENST00000460170 OLFM2O95897 454 aa13.65□□□□□ -0.23
PTPRU-205ENST00000460170 IGHG1P01857 330 aa13.65□□□□□ -0.23
PTPRU-205ENST00000460170 SBK2P0C263 348 aa13.65□□□□□ -0.23
PTPRU-205ENST00000460170 CHRNB1P11230 501 aa13.65□□□□□ -0.23
PTPRU-205ENST00000460170 TGFBR1P36897 503 aa13.65□□□□□ -0.23
PTPRU-205ENST00000460170 SNU13P55769 128 aaKnown RBP13.65□□□□□ -0.23
PTPRU-205ENST00000460170 C5orf46Q6UWT4 87 aa13.65□□□□□ -0.23
PTPRU-205ENST00000460170 RNF165Q6ZSG1 346 aa13.65□□□□□ -0.23
PTPRU-205ENST00000460170 CAMKMTQ7Z624 323 aa13.65□□□□□ -0.23
PTPRU-205ENST00000460170 SENP5Q96HI0 755 aaPredicted RBP13.65□□□□□ -0.23
PTPRU-205ENST00000460170 MMACHCQ9Y4U1 282 aa13.65□□□□□ -0.23
PTPRU-205ENST00000460170 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 CIB4A0PJX0 185 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 TLCD2A6NGC4 264 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 MAOAP21397 527 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 CSNK1EP49674 416 aaKnown RBP13.64□□□□□ -0.23
PTPRU-205ENST00000460170 CAMK2AQ9UQM7 478 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 GGT3PA6NGU5 568 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 ZNF705EA8MWA4 302 aaPredicted RBP13.64□□□□□ -0.23
PTPRU-205ENST00000460170 RAP2BP61225 183 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 GK2Q14410 553 aaPredicted RBP13.64□□□□□ -0.23
PTPRU-205ENST00000460170 NR0B2Q15466 257 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 LYSMD4Q5XG99 296 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 PPP1R3BQ86XI6 285 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 LILRB4Q8NHJ6 448 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 FANCFQ9NPI8 374 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 MAN2C1Q9NTJ4 1040 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 MED16Q9Y2X0 877 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 CORINQ9Y5Q5 1042 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 H3BUI4 141 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 SMAD2Q15796 467 aaKnown RBP13.64□□□□□ -0.23
PTPRU-205ENST00000460170 C3P1Q6ZMU1 363 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 OR6V1Q8N148 313 aa13.64□□□□□ -0.23
PTPRU-205ENST00000460170 HSD17B7P56937 341 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms