RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 TMEM45BQ96B21 275 aa13.08□□□□□ -0.32
LMNA-209ENST00000459904 ZNF837Q96EG3 531 aaPredicted RBP13.08□□□□□ -0.32
LMNA-209ENST00000459904 SNX18Q96RF0 628 aa13.08□□□□□ -0.32
LMNA-209ENST00000459904 KCNS3Q9BQ31 491 aa13.08□□□□□ -0.32
LMNA-209ENST00000459904 TPK1Q9H3S4 243 aa13.08□□□□□ -0.32
LMNA-209ENST00000459904 POLE3Q9NRF9 147 aa13.08□□□□□ -0.32
LMNA-209ENST00000459904 SLC6A13Q9NSD5 602 aa13.08□□□□□ -0.32
LMNA-209ENST00000459904 ASIC5Q9NY37 505 aa13.08□□□□□ -0.32
LMNA-209ENST00000459904 LOC390937A0A1W2PQ73 354 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 TMEM129A0AVI4 362 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 CCDC154A6NI56 674 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 AGAP5A6NIR3 686 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 AQP7P3A6NL99 342 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 hCG_2039718K7EN88 272 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 ZNF208O43345 1280 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 EIF1BO60739 113 aaKnown RBP13.07□□□□□ -0.32
LMNA-209ENST00000459904 LILRA1O75019 489 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 APEX1P27695 318 aaKnown RBP13.07□□□□□ -0.32
LMNA-209ENST00000459904 SLC1A3P43003 542 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 CLK1P49759 484 aaKnown RBP13.07□□□□□ -0.32
LMNA-209ENST00000459904 HOXC5Q00444 222 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 MAD2L1Q13257 205 aaPredicted RBP13.07□□□□□ -0.32
LMNA-209ENST00000459904 CHI3L2Q15782 390 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 MSMPQ1L6U9 139 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 RPS26P11Q5JNZ5 115 aaPredicted RBP13.07□□□□□ -0.32
LMNA-209ENST00000459904 AP1ARQ63HQ0 302 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 ATG16L1Q676U5 607 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 TMEM225Q6GV28 225 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 ZNF836Q6ZNA1 936 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 RINLQ6ZS11 566 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 CARM1Q86X55 608 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 EPHX4Q8IUS5 362 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 CDK20Q8IZL9 346 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 CKAP2Q8WWK9 683 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 NUF2Q9BZD4 464 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 ADAM19Q9H013 955 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 PLK3Q9H4B4 646 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 NARFLQ9H6Q4 476 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 PNPOQ9NVS9 261 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 TMEM45AQ9NWC5 275 aa13.07□□□□□ -0.32
LMNA-209ENST00000459904 CFAP73A6NFT4 308 aa13.06□□□□□ -0.32
LMNA-209ENST00000459904 POLR3GO15318 223 aaPredicted RBP13.06□□□□□ -0.32
LMNA-209ENST00000459904 FRS3O43559 492 aa13.06□□□□□ -0.32
LMNA-209ENST00000459904 GPIP06744 558 aa13.06□□□□□ -0.32
LMNA-209ENST00000459904 ALDOCP09972 364 aaKnown RBP13.06□□□□□ -0.32
LMNA-209ENST00000459904 NR2F1P10589 423 aa13.06□□□□□ -0.32
LMNA-209ENST00000459904 DAOP14920 347 aa13.06□□□□□ -0.32
LMNA-209ENST00000459904 IL7RP16871 459 aa13.06□□□□□ -0.32
LMNA-209ENST00000459904 HNF1AP20823 631 aa13.06□□□□□ -0.32
LMNA-209ENST00000459904 BGNP21810 368 aa13.06□□□□□ -0.32
LMNA-209ENST00000459904 RPS4Y1P22090 263 aaKnown RBP13.06□□□□□ -0.32
LMNA-209ENST00000459904 CBLP22681 906 aa13.06□□□□□ -0.32
LMNA-209ENST00000459904 CXCR1P25024 350 aa13.06□□□□□ -0.32
LMNA-209ENST00000459904 S100A3P33764 101 aa13.06□□□□□ -0.32
LMNA-209ENST00000459904 SRP14P37108 136 aaKnown RBP13.06□□□□□ -0.32
LMNA-209ENST00000459904 MDH1P40925 334 aaKnown RBP13.06□□□□□ -0.32
LMNA-209ENST00000459904 ACAA2P42765 397 aaKnown RBP13.06□□□□□ -0.32
LMNA-209ENST00000459904 IDH3GP51553 393 aaPredicted RBP13.06□□□□□ -0.32
LMNA-209ENST00000459904 UBE2NP61088 152 aaKnown RBP13.06□□□□□ -0.32
LMNA-209ENST00000459904 GUCY1A3Q02108 690 aa13.06□□□□□ -0.32
LMNA-209ENST00000459904 ANXA8L1Q5VT79 327 aa13.06□□□□□ -0.32
LMNA-209ENST00000459904 ZNF621Q6ZSS3 439 aa13.06□□□□□ -0.32
LMNA-209ENST00000459904 CREB3L2Q70SY1 520 aa13.06□□□□□ -0.32
LMNA-209ENST00000459904 SPATA21Q7Z572 469 aa13.06□□□□□ -0.32
LMNA-209ENST00000459904 CLIP4Q8N3C7 705 aa13.06□□□□□ -0.32
LMNA-209ENST00000459904 PMM1Q92871 262 aa13.06□□□□□ -0.32
LMNA-209ENST00000459904 SLC25A36Q96CQ1 311 aa13.06□□□□□ -0.32
LMNA-209ENST00000459904 B9A039 149 aa13.05□□□□□ -0.32
LMNA-209ENST00000459904 ZNF587BE7ETH6 402 aa13.05□□□□□ -0.32
LMNA-209ENST00000459904 NDUFS8O00217 210 aa13.05□□□□□ -0.32
LMNA-209ENST00000459904 WIPF1O43516 503 aa13.05□□□□□ -0.32
LMNA-209ENST00000459904 AGR2O95994 175 aa13.05□□□□□ -0.32
LMNA-209ENST00000459904 CRYAAP02489 173 aa13.05□□□□□ -0.32
LMNA-209ENST00000459904 THBS2P35442 1172 aa13.05□□□□□ -0.32
LMNA-209ENST00000459904 HTR3AP46098 478 aa13.05□□□□□ -0.32
LMNA-209ENST00000459904 CLDN17P56750 224 aa13.05□□□□□ -0.32
LMNA-209ENST00000459904 ABCE1P61221 599 aaKnown RBP13.05□□□□□ -0.32
LMNA-209ENST00000459904 ARF1P84077 181 aaKnown RBP13.05□□□□□ -0.32
LMNA-209ENST00000459904 ROR2Q01974 943 aaKnown RBP13.05□□□□□ -0.32
LMNA-209ENST00000459904 NPRL3Q12980 569 aa13.05□□□□□ -0.32
LMNA-209ENST00000459904 ZSWIM7Q19AV6 140 aa13.05□□□□□ -0.32
LMNA-209ENST00000459904 LRRC74BQ6ZQY2 392 aa13.05□□□□□ -0.32
LMNA-209ENST00000459904 WDFY1Q8IWB7 410 aa13.05□□□□□ -0.32
LMNA-209ENST00000459904 POMGNT2Q8NAT1 580 aa13.05□□□□□ -0.32
LMNA-209ENST00000459904 TRNT1Q96Q11 434 aaKnown RBP13.05□□□□□ -0.32
LMNA-209ENST00000459904 SORT1Q99523 831 aa13.05□□□□□ -0.32
LMNA-209ENST00000459904 KATNB1Q9BVA0 655 aa13.05□□□□□ -0.32
LMNA-209ENST00000459904 LPAR2Q9HBW0 351 aa13.05□□□□□ -0.32
LMNA-209ENST00000459904 CHST2Q9Y4C5 530 aa13.05□□□□□ -0.32
LMNA-209ENST00000459904 OR6C65A6NJZ3 312 aa13.04□□□□□ -0.32
LMNA-209ENST00000459904 E9PBE3 544 aa13.04□□□□□ -0.32
LMNA-209ENST00000459904 WNT9BO14905 357 aa13.04□□□□□ -0.32
LMNA-209ENST00000459904 VENTXO95231 258 aa13.04□□□□□ -0.32
LMNA-209ENST00000459904 PGRP06401 933 aa13.04□□□□□ -0.32
LMNA-209ENST00000459904 GUSBP08236 651 aa13.04□□□□□ -0.32
LMNA-209ENST00000459904 ADRA2AP08913 450 aa13.04□□□□□ -0.32
LMNA-209ENST00000459904 ETFAP13804 333 aa13.04□□□□□ -0.32
LMNA-209ENST00000459904 TCN1P20061 433 aaPredicted RBP13.04□□□□□ -0.32
LMNA-209ENST00000459904 SERPINB5P36952 375 aa13.04□□□□□ -0.32
LMNA-209ENST00000459904 SQLEQ14534 574 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms