RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 SPENQ96T58 3664 aaKnown RBP9.37□□□□□ -0.91
USP39-210ENST00000459775 PINLYPA6NC86 204 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 ZNF891A8MT65 544 aaPredicted RBP9.37□□□□□ -0.91
USP39-210ENST00000459775 H0YAE9 185 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 ZNF264O43296 627 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 DEAF1O75398 565 aaPredicted RBP9.37□□□□□ -0.91
USP39-210ENST00000459775 GUSBP08236 651 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 PITPNBP48739 271 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 DNASE1L1P49184 302 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 TAS2R41P59536 307 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 MEP1AQ16819 746 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 FGD3Q5JSP0 725 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 ABHD17BQ5VST6 288 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 OPN5Q6U736 354 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 ARSKQ6UWY0 536 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 CYP4Z2PQ8N1L4 340 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 FAM169BQ8N8A8 192 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 NANOS1Q8WY41 292 aaKnown RBP9.37□□□□□ -0.91
USP39-210ENST00000459775 TMCO6Q96DC7 493 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 JSRP1Q96MG2 331 aaPredicted RBP9.37□□□□□ -0.91
USP39-210ENST00000459775 IP6K3Q96PC2 410 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 HOXD1Q9GZZ0 328 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 KLHL1Q9NR64 748 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 DEPPQ9NTK1 212 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 FBXL2Q9UKC9 423 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 SLC7A7Q9UM01 511 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 LYVE1Q9Y5Y7 322 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 PRRC2CQ9Y520 2896 aaKnown RBP9.37□□□□□ -0.91
USP39-210ENST00000459775 CNTRLQ7Z7A1 2325 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 URB1O60287 2271 aaKnown RBP9.37□□□□□ -0.91
USP39-210ENST00000459775 HELZ2Q9BYK8 2649 aaKnown RBP9.37□□□□□ -0.91
USP39-210ENST00000459775 K7EM74 188 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 TNFRSF11BO00300 401 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 GPRIN2O60269 458 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 NEURL1O76050 574 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 NUDT14O95848 222 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 GSTT1P30711 240 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 GSSP48637 474 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 IDH2P48735 452 aaKnown RBP9.37□□□□□ -0.91
USP39-210ENST00000459775 OR1Q1Q15612 314 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 EIPR1Q53HC9 387 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 GDF7Q7Z4P5 450 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 WDSUB1Q8N9V3 476 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 FAM71CQ8NEG0 241 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 OR9Q2Q8NGE9 314 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 OR5M1Q8NGP8 315 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 SLC7A13Q8TCU3 470 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 EME1Q96AY2 570 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 GNRHR2Q96P88 292 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 DMRTA2Q96SC8 542 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 REEP1Q9H902 201 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 LRFN1Q9P244 771 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 STOML1Q9UBI4 398 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 ICAM5Q9UMF0 924 aa9.37□□□□□ -0.91
USP39-210ENST00000459775 A0A1B0GWA3 101 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 EI24O14681 340 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 CYTIPO60759 359 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 MITFO75030 526 aaPredicted RBP9.36□□□□□ -0.91
USP39-210ENST00000459775 GADD45GO95257 159 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 LYPD3O95274 346 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 RASAL1O95294 804 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 FCGR1AP12314 374 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 CYB561P49447 251 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 PPP5CP53041 499 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 OGFRL1Q5TC84 451 aaPredicted RBP9.36□□□□□ -0.91
USP39-210ENST00000459775 SLC22A10Q63ZE4 541 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 PODNL1Q6PEZ8 512 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 SLC15A4Q8N697 577 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 OR4C15Q8NGM1 316 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 LHFPL5Q8TAF8 219 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 TMEM255BQ8WV15 326 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 SLC41A3Q96GZ6 507 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 BDH2Q9BUT1 245 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 FNDC11Q9BVV2 318 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 DSN1Q9H410 356 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 SH2D2AQ9NP31 389 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 KRT84Q9NSB2 600 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 PDP1Q9P0J1 537 aaPredicted RBP9.36□□□□□ -0.91
USP39-210ENST00000459775 VDAC3Q9Y277 283 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 PCDHGB6Q9Y5F9 930 aa9.36□□□□□ -0.91
USP39-210ENST00000459775 A0A0U1RQV5 110 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 hCG_1807616A0A1W2PRN6 198 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 G3V2T6 193 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 KPNA4O00629 521 aaPredicted RBP9.35□□□□□ -0.91
USP39-210ENST00000459775 CTAG2O75638 210 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 H1F0P07305 194 aaKnown RBP9.35□□□□□ -0.91
USP39-210ENST00000459775 NGFRP08138 427 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 FUT1P19526 365 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 ELAVL4P26378 380 aaKnown RBP9.35□□□□□ -0.91
USP39-210ENST00000459775 CAMLGP49069 296 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 HLCSP50747 726 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 EPS8Q12929 822 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 OR1C1Q15619 314 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.35□□□□□ -0.916e-7■□□□□ 9.1
USP39-210ENST00000459775 AGAP7PQ5VUJ5 663 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 IRAK1BP1Q5VVH5 260 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 ZBTB49Q6ZSB9 765 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 PSD4Q8NDX1 1056 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 PAQR8Q8TEZ7 354 aa9.35□□□□□ -0.91
USP39-210ENST00000459775 RNF138Q8WVD3 245 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms