RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 ITGB1BP2Q9UKP3 347 aa18.34■□□□□ 0.53
VARS-218ENST00000459667 BAG5Q9UL15 447 aa18.34■□□□□ 0.53
VARS-218ENST00000459667 SPG11Q96JI7 2443 aa18.33■□□□□ 0.53
VARS-218ENST00000459667 CHP2O43745 196 aa18.33■□□□□ 0.52
VARS-218ENST00000459667 LYZL6O75951 148 aa18.33■□□□□ 0.52
VARS-218ENST00000459667 VAMP5O95183 116 aa18.33■□□□□ 0.52
VARS-218ENST00000459667 COX5AP20674 150 aa18.33■□□□□ 0.52
VARS-218ENST00000459667 PTNP21246 168 aa18.33■□□□□ 0.52
VARS-218ENST00000459667 IGHV1-2P23083 117 aa18.33■□□□□ 0.52
VARS-218ENST00000459667 PSME3P61289 254 aa18.33■□□□□ 0.52
VARS-218ENST00000459667 LIPEQ05469 1076 aa18.33■□□□□ 0.52
VARS-218ENST00000459667 C8orf82Q6P1X6 216 aaPredicted RBP18.33■□□□□ 0.52
VARS-218ENST00000459667 TMEM45BQ96B21 275 aa18.33■□□□□ 0.52
VARS-218ENST00000459667 EPYCQ99645 322 aa18.33■□□□□ 0.52
VARS-218ENST00000459667 SPAG4Q9NPE6 437 aa18.33■□□□□ 0.52
VARS-218ENST00000459667 RASD1Q9Y272 281 aa18.33■□□□□ 0.52
VARS-218ENST00000459667 SH3GLB1Q9Y371 365 aa18.33■□□□□ 0.52
VARS-218ENST00000459667 HRNRQ86YZ3 2850 aaPredicted RBP18.33■□□□□ 0.52
VARS-218ENST00000459667 A0A1W2PPR1 153 aa18.32■□□□□ 0.52
VARS-218ENST00000459667 ENO4A6NNW6 628 aa18.32■□□□□ 0.52
VARS-218ENST00000459667 NME4O00746 187 aa18.32■□□□□ 0.52
VARS-218ENST00000459667 GSTA4O15217 222 aa18.32■□□□□ 0.52
VARS-218ENST00000459667 FZD7O75084 574 aa18.32■□□□□ 0.52
VARS-218ENST00000459667 KDELR2P33947 212 aa18.32■□□□□ 0.52
VARS-218ENST00000459667 MNAT1P51948 309 aa18.32■□□□□ 0.52
VARS-218ENST00000459667 ALKBH2Q6NS38 261 aa18.32■□□□□ 0.52
VARS-218ENST00000459667 ADAMTS16Q8TE57 1224 aa18.32■□□□□ 0.52
VARS-218ENST00000459667 ZNF385AQ96PM9 386 aaKnown RBP18.32■□□□□ 0.52
VARS-218ENST00000459667 USB1Q9BQ65 265 aaKnown RBP18.32■□□□□ 0.52
VARS-218ENST00000459667 ALG2Q9H553 416 aa18.32■□□□□ 0.52
VARS-218ENST00000459667 PLEKHF2Q9H8W4 249 aa18.32■□□□□ 0.52
VARS-218ENST00000459667 ASB6Q9NWX5 421 aa18.32■□□□□ 0.52
VARS-218ENST00000459667 NDE1Q9NXR1 346 aa18.32■□□□□ 0.52
VARS-218ENST00000459667 GMPR2Q9P2T1 348 aaKnown RBP18.32■□□□□ 0.52
VARS-218ENST00000459667 SEC14L4Q9UDX3 406 aa18.32■□□□□ 0.52
VARS-218ENST00000459667 MALT1Q9UDY8 824 aa18.32■□□□□ 0.52
VARS-218ENST00000459667 ST6GALNAC2Q9UJ37 374 aa18.32■□□□□ 0.52
VARS-218ENST00000459667 AKAP6Q13023 2319 aa18.31■□□□□ 0.52
VARS-218ENST00000459667 M0R082 166 aa18.31■□□□□ 0.52
VARS-218ENST00000459667 TNFRSF1BP20333 461 aa18.31■□□□□ 0.52
VARS-218ENST00000459667 GRPRP30550 384 aa18.31■□□□□ 0.52
VARS-218ENST00000459667 FAPQ12884 760 aa18.31■□□□□ 0.52
VARS-218ENST00000459667 KRT72Q14CN4 511 aa18.31■□□□□ 0.52
VARS-218ENST00000459667 CYBRD1Q53TN4 286 aa18.31■□□□□ 0.52
VARS-218ENST00000459667 BEX5Q5H9J7 111 aa18.31■□□□□ 0.52
VARS-218ENST00000459667 AAED1Q7RTV5 226 aa18.31■□□□□ 0.52
VARS-218ENST00000459667 CARM1Q86X55 608 aa18.31■□□□□ 0.52
VARS-218ENST00000459667 ZIC4Q8N9L1 334 aa18.31■□□□□ 0.52
VARS-218ENST00000459667 ZNF417Q8TAU3 575 aa18.31■□□□□ 0.52
VARS-218ENST00000459667 ZNF587Q96SQ5 575 aaPredicted RBP18.31■□□□□ 0.52
VARS-218ENST00000459667 KCTD14Q9BQ13 255 aaPredicted RBP18.31■□□□□ 0.52
VARS-218ENST00000459667 TMEM43Q9BTV4 400 aa18.31■□□□□ 0.52
VARS-218ENST00000459667 PCDHAC1Q9H158 963 aa18.31■□□□□ 0.52
VARS-218ENST00000459667 SLC7A7Q9UM01 511 aa18.31■□□□□ 0.52
VARS-218ENST00000459667 EDARQ9UNE0 448 aa18.31■□□□□ 0.52
VARS-218ENST00000459667 MYO9AB2RTY4 2548 aa18.31■□□□□ 0.52
VARS-218ENST00000459667 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.3■□□□□ 0.52
VARS-218ENST00000459667 TRAPPC13A5PLN9 417 aa18.3■□□□□ 0.52
VARS-218ENST00000459667 KLF4O43474 513 aa18.3■□□□□ 0.52
VARS-218ENST00000459667 CBLP22681 906 aa18.3■□□□□ 0.52
VARS-218ENST00000459667 MXRA7P84157 204 aa18.3■□□□□ 0.52
VARS-218ENST00000459667 MFSD13AQ14CX5 517 aa18.3■□□□□ 0.52
VARS-218ENST00000459667 TAB1Q15750 504 aa18.3■□□□□ 0.52
VARS-218ENST00000459667 STK11Q15831 433 aa18.3■□□□□ 0.52
VARS-218ENST00000459667 PAMR1Q6UXH9 720 aa18.3■□□□□ 0.52
VARS-218ENST00000459667 LINC00114Q6XXX2 140 aa18.3■□□□□ 0.52
VARS-218ENST00000459667 CREB3L2Q70SY1 520 aa18.3■□□□□ 0.52
VARS-218ENST00000459667 TSPYL5Q86VY4 417 aaPredicted RBP18.3■□□□□ 0.52
VARS-218ENST00000459667 ZNF433Q8N7K0 673 aaPredicted RBP18.3■□□□□ 0.52
VARS-218ENST00000459667 OR6S1Q8NH40 331 aa18.3■□□□□ 0.52
VARS-218ENST00000459667 LZICQ8WZA0 190 aa18.3■□□□□ 0.52
VARS-218ENST00000459667 HSD17B8Q92506 261 aa18.3■□□□□ 0.52
VARS-218ENST00000459667 NINJ1Q92982 152 aa18.3■□□□□ 0.52
VARS-218ENST00000459667 HS3ST6Q96QI5 342 aa18.3■□□□□ 0.52
VARS-218ENST00000459667 SLC7A10Q9NS82 523 aa18.3■□□□□ 0.52
VARS-218ENST00000459667 ARL8BQ9NVJ2 186 aa18.3■□□□□ 0.52
VARS-218ENST00000459667 ADA2Q9NZK5 511 aa18.3■□□□□ 0.52
VARS-218ENST00000459667 ABCD2Q9UBJ2 740 aa18.3■□□□□ 0.52
VARS-218ENST00000459667 UPB1Q9UBR1 384 aa18.3■□□□□ 0.52
VARS-218ENST00000459667 PLEKHA6Q9Y2H5 1048 aa18.3■□□□□ 0.52
VARS-218ENST00000459667 CCDC168Q8NDH2 2452 aa18.29■□□□□ 0.52
VARS-218ENST00000459667 RAD51DO75771 328 aa18.29■□□□□ 0.52
VARS-218ENST00000459667 LYPD3O95274 346 aa18.29■□□□□ 0.52
VARS-218ENST00000459667 BGLAPP02818 100 aa18.29■□□□□ 0.52
VARS-218ENST00000459667 THY1P04216 161 aa18.29■□□□□ 0.52
VARS-218ENST00000459667 GGT1P19440 569 aa18.29■□□□□ 0.52
VARS-218ENST00000459667 LOXP28300 417 aaPredicted RBP18.29■□□□□ 0.52
VARS-218ENST00000459667 GSK3BP49841 420 aa18.29■□□□□ 0.52
VARS-218ENST00000459667 TSPO2Q5TGU0 170 aa18.29■□□□□ 0.52
VARS-218ENST00000459667 C16orf89Q6UX73 402 aa18.29■□□□□ 0.52
VARS-218ENST00000459667 WDR88Q6ZMY6 472 aa18.29■□□□□ 0.52
VARS-218ENST00000459667 DEF8Q6ZN54 512 aa18.29■□□□□ 0.52
VARS-218ENST00000459667 H1FNTQ75WM6 255 aaPredicted RBP18.29■□□□□ 0.52
VARS-218ENST00000459667 EPHX4Q8IUS5 362 aa18.29■□□□□ 0.52
VARS-218ENST00000459667 KDM8Q8N371 416 aa18.29■□□□□ 0.52
VARS-218ENST00000459667 FITM2Q8N6M3 262 aa18.29■□□□□ 0.52
VARS-218ENST00000459667 C10orf53Q8N6V4 93 aa18.29■□□□□ 0.52
VARS-218ENST00000459667 BCAS4Q8TDM0 211 aa18.29■□□□□ 0.52
VARS-218ENST00000459667 TPD52L3Q96J77 140 aa18.29■□□□□ 0.52
VARS-218ENST00000459667 TAS2R16Q9NYV7 291 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms