RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 KLF11O14901 512 aa18.75■□□□□ 0.59
CPNE1-220ENST00000458038 LY6HO94772 140 aa18.75■□□□□ 0.59
CPNE1-220ENST00000458038 IL6P05231 212 aa18.75■□□□□ 0.59
CPNE1-220ENST00000458038 ALDOCP09972 364 aaKnown RBP18.75■□□□□ 0.59
CPNE1-220ENST00000458038 TFPTP0C1Z6 253 aa18.75■□□□□ 0.59
CPNE1-220ENST00000458038 APEHP13798 732 aaKnown RBP18.75■□□□□ 0.59
CPNE1-220ENST00000458038 CDKN2CP42773 168 aa18.75■□□□□ 0.59
CPNE1-220ENST00000458038 GGTLC2Q14390 218 aa18.75■□□□□ 0.59
CPNE1-220ENST00000458038 EFNB3Q15768 340 aa18.75■□□□□ 0.59
CPNE1-220ENST00000458038 RNF220Q5VTB9 566 aa18.75■□□□□ 0.59
CPNE1-220ENST00000458038 C1orf140Q5VVS0 124 aa18.75■□□□□ 0.59
CPNE1-220ENST00000458038 ANKRD16Q6P6B7 361 aa18.75■□□□□ 0.59
CPNE1-220ENST00000458038 CADM2Q8N3J6 435 aa18.75■□□□□ 0.59
CPNE1-220ENST00000458038 STK35Q8TDR2 534 aa18.75■□□□□ 0.59
CPNE1-220ENST00000458038 BCL2L2Q92843 193 aaPredicted RBP18.75■□□□□ 0.59
CPNE1-220ENST00000458038 ADPRHL2Q9NX46 363 aa18.75■□□□□ 0.59
CPNE1-220ENST00000458038 GPR45Q9Y5Y3 372 aa18.75■□□□□ 0.59
CPNE1-220ENST00000458038 DSPPQ9NZW4 1301 aa18.74■□□□□ 0.59
CPNE1-220ENST00000458038 TMEM247A6NEH6 219 aa18.74■□□□□ 0.59
CPNE1-220ENST00000458038 TRPC5OSA6NMA1 111 aa18.74■□□□□ 0.59
CPNE1-220ENST00000458038 SDHDO14521 159 aa18.74■□□□□ 0.59
CPNE1-220ENST00000458038 NPIPB7O75200 414 aa18.74■□□□□ 0.59
CPNE1-220ENST00000458038 C1QCP02747 245 aa18.74■□□□□ 0.59
CPNE1-220ENST00000458038 GSNP06396 782 aa18.74■□□□□ 0.59
CPNE1-220ENST00000458038 GKN3PP0CG01 181 aa18.74■□□□□ 0.59
CPNE1-220ENST00000458038 ZCCHC18P0CG32 403 aa18.74■□□□□ 0.59
CPNE1-220ENST00000458038 BGNP21810 368 aa18.74■□□□□ 0.59
CPNE1-220ENST00000458038 IL12AP29459 219 aa18.74■□□□□ 0.59
CPNE1-220ENST00000458038 P2RY4P51582 365 aa18.74■□□□□ 0.59
CPNE1-220ENST00000458038 NME5P56597 212 aa18.74■□□□□ 0.59
CPNE1-220ENST00000458038 PRAMEF8Q5VWM4 474 aa18.74■□□□□ 0.59
CPNE1-220ENST00000458038 PRAMEF7Q5VXH5 474 aa18.74■□□□□ 0.59
CPNE1-220ENST00000458038 MFSD8Q8NHS3 518 aa18.74■□□□□ 0.59
CPNE1-220ENST00000458038 PNPT1Q8TCS8 783 aaKnown RBP18.74■□□□□ 0.59
CPNE1-220ENST00000458038 MSI2Q96DH6 328 aaKnown RBP18.74■□□□□ 0.59
CPNE1-220ENST00000458038 FOXN4Q96NZ1 517 aa18.74■□□□□ 0.59
CPNE1-220ENST00000458038 VRK1Q99986 396 aaPredicted RBP18.74■□□□□ 0.59
CPNE1-220ENST00000458038 RAB1BQ9H0U4 201 aa18.74■□□□□ 0.59
CPNE1-220ENST00000458038 PLK3Q9H4B4 646 aa18.74■□□□□ 0.59
CPNE1-220ENST00000458038 PNPOQ9NVS9 261 aa18.74■□□□□ 0.59
CPNE1-220ENST00000458038 SVEP1Q4LDE5 3571 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 A0A0G2JPF8 293 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 HNRNPCL2B2RXH8 293 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 HNRNPCL3B7ZW38 293 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 FRS3O43559 492 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 HNRNPCL1O60812 293 aaKnown RBP18.73■□□□□ 0.59
CPNE1-220ENST00000458038 LGI1O95970 557 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 IGLV1-44P01699 117 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 ERCC1P07992 297 aaPredicted RBP18.73■□□□□ 0.59
CPNE1-220ENST00000458038 OR4A8P0C604 315 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 HNRNPCL4P0DMR1 293 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 NCF2P19878 526 aaPredicted RBP18.73■□□□□ 0.59
CPNE1-220ENST00000458038 IGFBP5P24593 272 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 PPOXP50336 477 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 NAAAQ02083 359 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 BNIP2Q12982 314 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 SQLEQ14534 574 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 MAPK11Q15759 364 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 ADIPOQQ15848 244 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 KRTAP24-1Q3LI83 254 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 IQCCQ4KMZ1 466 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 FAM120AOSQ5T036 256 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 ZNF836Q6ZNA1 936 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 VRK2Q86Y07 508 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 SLC35B4Q969S0 331 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 PRR14Q9BWN1 585 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 SPATA9Q9BWV2 254 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 ZNF443Q9Y2A4 671 aaPredicted RBP18.73■□□□□ 0.59
CPNE1-220ENST00000458038 IFT52Q9Y366 437 aa18.73■□□□□ 0.59
CPNE1-220ENST00000458038 HDAC3O15379 428 aa18.72■□□□□ 0.59
CPNE1-220ENST00000458038 AHSA1O95433 338 aa18.72■□□□□ 0.59
CPNE1-220ENST00000458038 IDO1P14902 403 aa18.72■□□□□ 0.59
CPNE1-220ENST00000458038 ZNF23P17027 643 aa18.72■□□□□ 0.59
CPNE1-220ENST00000458038 CRATP43155 626 aa18.72■□□□□ 0.59
CPNE1-220ENST00000458038 SELENOPP49908 381 aa18.72■□□□□ 0.59
CPNE1-220ENST00000458038 IDH3GP51553 393 aaPredicted RBP18.72■□□□□ 0.59
CPNE1-220ENST00000458038 BST1Q10588 318 aa18.72■□□□□ 0.59
CPNE1-220ENST00000458038 NIPAL3Q6P499 406 aa18.72■□□□□ 0.59
CPNE1-220ENST00000458038 EPHX4Q8IUS5 362 aa18.72■□□□□ 0.59
CPNE1-220ENST00000458038 CCDC36Q8IYA8 594 aa18.72■□□□□ 0.59
CPNE1-220ENST00000458038 NUP37Q8NFH4 326 aa18.72■□□□□ 0.59
CPNE1-220ENST00000458038 SLC38A5Q8WUX1 472 aa18.72■□□□□ 0.59
CPNE1-220ENST00000458038 RMND5AQ9H871 391 aa18.72■□□□□ 0.59
CPNE1-220ENST00000458038 KCNK9Q9NPC2 374 aa18.72■□□□□ 0.59
CPNE1-220ENST00000458038 RCE1Q9Y256 329 aa18.72■□□□□ 0.59
CPNE1-220ENST00000458038 TMEM229AB2RXF0 380 aa18.71■□□□□ 0.59
CPNE1-220ENST00000458038 SLCO1B7G3V0H7 640 aa18.71■□□□□ 0.59
CPNE1-220ENST00000458038 RPL36A-HNRNPH2H7BZ11 118 aa18.71■□□□□ 0.59
CPNE1-220ENST00000458038 ANP32DO95626 131 aa18.71■□□□□ 0.59
CPNE1-220ENST00000458038 CECR9P0C854 216 aa18.71■□□□□ 0.59
CPNE1-220ENST00000458038 ZNF43P17038 809 aa18.71■□□□□ 0.59
CPNE1-220ENST00000458038 MVDP53602 400 aa18.71■□□□□ 0.59
CPNE1-220ENST00000458038 DSTNP60981 165 aa18.71■□□□□ 0.59
CPNE1-220ENST00000458038 CARTPTQ16568 116 aa18.71■□□□□ 0.59
CPNE1-220ENST00000458038 MSANTD1Q6ZTZ1 278 aa18.71■□□□□ 0.59
CPNE1-220ENST00000458038 CROCCP2Q86T23 111 aa18.71■□□□□ 0.59
CPNE1-220ENST00000458038 ARIH2OSQ8N7S6 290 aa18.71■□□□□ 0.59
CPNE1-220ENST00000458038 IL17RDQ8NFM7 739 aa18.71■□□□□ 0.59
CPNE1-220ENST00000458038 NEU4Q8WWR8 484 aaPredicted RBP18.71■□□□□ 0.59
CPNE1-220ENST00000458038 C3orf49Q96BT1 292 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms