RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 H7C1Q1 480 aa18.26■□□□□ 0.51
SNX27-204ENST00000458013 DVL1O14640 695 aa18.26■□□□□ 0.51
SNX27-204ENST00000458013 CLEC2LP0C7M8 214 aa18.26■□□□□ 0.51
SNX27-204ENST00000458013 DVL1P1P54792 670 aaPredicted RBP18.26■□□□□ 0.51
SNX27-204ENST00000458013 GALEQ14376 348 aa18.26■□□□□ 0.51
SNX27-204ENST00000458013 NPSR1Q6W5P4 371 aa18.26■□□□□ 0.51
SNX27-204ENST00000458013 MMP21Q8N119 569 aa18.26■□□□□ 0.51
SNX27-204ENST00000458013 OR5AS1Q8N127 324 aa18.26■□□□□ 0.51
SNX27-204ENST00000458013 BHLHE23Q8NDY6 225 aa18.26■□□□□ 0.51
SNX27-204ENST00000458013 ACOT11Q8WXI4 607 aaPredicted RBP18.26■□□□□ 0.51
SNX27-204ENST00000458013 NTMT1Q9BV86 223 aa18.26■□□□□ 0.51
SNX27-204ENST00000458013 PRMT8Q9NR22 394 aaPredicted RBP18.26■□□□□ 0.51
SNX27-204ENST00000458013 BOLA1Q9Y3E2 137 aa18.26■□□□□ 0.51
SNX27-204ENST00000458013 SOCS7O14512 581 aa18.26■□□□□ 0.51
SNX27-204ENST00000458013 SLC2A1P11166 492 aa18.26■□□□□ 0.51
SNX27-204ENST00000458013 BRICD5Q6PL45 260 aa18.26■□□□□ 0.51
SNX27-204ENST00000458013 LILRA3Q8N6C8 439 aaPredicted RBP18.26■□□□□ 0.51
SNX27-204ENST00000458013 SLC25A31Q9H0C2 315 aa18.26■□□□□ 0.51
SNX27-204ENST00000458013 TMEM184BQ9Y519 407 aaPredicted RBP18.26■□□□□ 0.51
SNX27-204ENST00000458013 DRGXA6NNA5 263 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 CCSO14618 274 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 SEC14L2O76054 403 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 CCL11P51671 97 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 EMP3P54852 163 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 OVCH1Q7RTY7 1134 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 PM20D2Q8IYS1 436 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 RBMXL3Q8N7X1 1067 aaKnown RBP18.25■□□□□ 0.51
SNX27-204ENST00000458013 PLPP7Q8NBV4 271 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 MCOLN1Q9GZU1 580 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 NOX4Q9NPH5 578 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 OSGIN2Q9Y236 505 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 NAP1L6A6NFF2 107 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 GRPP07492 148 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 MYOGP15173 224 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 PLA2G7Q13093 441 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 HNRNPA1L2Q32P51 320 aaKnown RBP18.25■□□□□ 0.51
SNX27-204ENST00000458013 FAM78AQ5JUQ0 283 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 ZNF439Q8NDP4 499 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 STT3BQ8TCJ2 826 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 OCSTAMPQ9BR26 566 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 MTCH1Q9NZJ7 389 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 NXT1Q9UKK6 140 aaKnown RBP18.25■□□□□ 0.51
SNX27-204ENST00000458013 RABL2BQ9UNT1 228 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 TCRBV3S1A0A5B6 114 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 C7orf72A4D263 438 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 ARHGEF15O94989 841 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 TACR1P25103 407 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 GNB1P62873 340 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 VEZF1Q14119 521 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 EDDM3AQ14507 147 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 DUSP7Q16829 419 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 C9orf152Q5JTZ5 239 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 MORN1Q5T089 497 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 ZNF684Q5T5D7 378 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 ENTHD1Q8IYW4 607 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 ZNF566Q969W8 418 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 TWSG1Q9GZX9 223 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 POFUT1Q9H488 388 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 ZNF286AQ9HBT8 521 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 IGKV6-21A0A0C4DH24 114 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 HS3ST1O14792 307 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 B4GALT3O60512 393 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 IGFBP1P08833 259 aaPredicted RBP18.25■□□□□ 0.51
SNX27-204ENST00000458013 HOXD9P28356 352 aaPredicted RBP18.25■□□□□ 0.51
SNX27-204ENST00000458013 PRLHRP49683 370 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 RPL11P62913 178 aaKnown RBP18.25■□□□□ 0.51
SNX27-204ENST00000458013 PDLIM3Q53GG5 364 aaPredicted RBP18.25■□□□□ 0.51
SNX27-204ENST00000458013 NHSL2Q5HYW2 709 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 ATPAF1Q5TC12 328 aaPredicted RBP18.25■□□□□ 0.51
SNX27-204ENST00000458013 OTPQ5XKR4 325 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 NRARPQ7Z6K4 114 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 SLC35F3Q8IY50 421 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 ZNF597Q96LX8 424 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 PCDHGA5Q9Y5G8 931 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 CASP3P42574 277 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 HSF5Q4G112 596 aaPredicted RBP18.25■□□□□ 0.51
SNX27-204ENST00000458013 STEAP3Q658P3 488 aa18.25■□□□□ 0.51
SNX27-204ENST00000458013 MSTNO14793 375 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 GOLM1Q8NBJ4 401 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 OR4A16Q8NH70 328 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 GLTPQ9NZD2 209 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 MYO10Q9HD67 2058 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 SLC43A1O75387 559 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 CLDN1O95832 211 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 NDUFA6P56556 154 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 KCNJ10P78508 379 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 ZNF705AQ6ZN79 300 aaPredicted RBP18.24■□□□□ 0.51
SNX27-204ENST00000458013 C19orf47Q8N9M1 422 aaKnown RBP18.24■□□□□ 0.51
SNX27-204ENST00000458013 UBXN10Q96LJ8 280 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 PITHD1Q9GZP4 211 aaPredicted RBP18.24■□□□□ 0.51
SNX27-204ENST00000458013 PURGQ9UJV8 347 aaKnown RBP18.24■□□□□ 0.51
SNX27-204ENST00000458013 IGKV6D-21A0A0A0MT36 114 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 SIGLEC6O43699 453 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 UBBP0CG47 229 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 UBCP0CG48 685 aaKnown RBP18.24■□□□□ 0.51
SNX27-204ENST00000458013 RPS27AP62979 156 aaKnown RBP18.24■□□□□ 0.51
SNX27-204ENST00000458013 UBA52P62987 128 aaKnown RBP18.24■□□□□ 0.51
SNX27-204ENST00000458013 ZNF91Q05481 1191 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 CYS1Q717R9 158 aa18.24■□□□□ 0.51
SNX27-204ENST00000458013 KLHDC9Q8NEP7 349 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms