RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 A0A1B0GX78 115 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 MEIOCA2RUB1 952 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 FAM25AB3EWG3 89 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 FAM25CB3EWG5 89 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 FAM25GB3EWG6 89 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 SELENOFO60613 162 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 ATP6V1G1O75348 118 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 SERPINI2O75830 405 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 GDI2P50395 445 aaKnown RBP15.2■□□□□ 0.02
CCDC43-202ENST00000457422 ZP2Q05996 745 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 KCNJ8Q15842 424 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 WDR74Q6RFH5 385 aaPredicted RBP15.2■□□□□ 0.02
CCDC43-202ENST00000457422 OR13C5Q8NGS8 318 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 OR6F1Q8NGZ6 308 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 RPS4Y2Q8TD47 263 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 SNX33Q8WV41 574 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 CLDN23Q96B33 292 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 RNF31Q96EP0 1072 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 RTN4RQ9BZR6 473 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 DUSP15Q9H1R2 295 aaPredicted RBP15.2■□□□□ 0.02
CCDC43-202ENST00000457422 COPS3Q9UNS2 423 aa15.2■□□□□ 0.02
CCDC43-202ENST00000457422 UNC13CQ8NB66 2214 aa15.19■□□□□ 0.02
CCDC43-202ENST00000457422 RP1P56715 2156 aa15.19■□□□□ 0.02
CCDC43-202ENST00000457422 A0A1W2PRG6 482 aa15.19■□□□□ 0.02
CCDC43-202ENST00000457422 CDC14CA4D256 554 aa15.19■□□□□ 0.02
CCDC43-202ENST00000457422 C4orf47A7E2U8 309 aa15.19■□□□□ 0.02
CCDC43-202ENST00000457422 BLOC1S5-TXNDC5H3BN57 136 aa15.19■□□□□ 0.02
CCDC43-202ENST00000457422 TSPAN2O60636 221 aa15.19■□□□□ 0.02
CCDC43-202ENST00000457422 GATBO75879 557 aaKnown RBP15.19■□□□□ 0.02
CCDC43-202ENST00000457422 SDHAP31040 664 aa15.19■□□□□ 0.02
CCDC43-202ENST00000457422 KIR2DL3P43628 341 aa15.19■□□□□ 0.02
CCDC43-202ENST00000457422 MAP2K3P46734 347 aa15.19■□□□□ 0.02
CCDC43-202ENST00000457422 OR10A3P58181 314 aa15.19■□□□□ 0.02
CCDC43-202ENST00000457422 ZNF117Q03924 483 aa15.19■□□□□ 0.02
CCDC43-202ENST00000457422 LTBQ06643 244 aa15.19■□□□□ 0.02
CCDC43-202ENST00000457422 ALG10Q5BKT4 473 aa15.19■□□□□ 0.02
CCDC43-202ENST00000457422 LEG1Q6P5S2 330 aa15.19■□□□□ 0.02
CCDC43-202ENST00000457422 EXD3Q8N9H8 876 aa15.19■□□□□ 0.02
CCDC43-202ENST00000457422 THAP4Q8WY91 577 aa15.19■□□□□ 0.02
CCDC43-202ENST00000457422 HLA-CQ95604 372 aa15.19■□□□□ 0.02
CCDC43-202ENST00000457422 ZNF501Q96CX3 271 aaPredicted RBP15.19■□□□□ 0.02
CCDC43-202ENST00000457422 Q96M85 177 aa15.19■□□□□ 0.02
CCDC43-202ENST00000457422 MMP28Q9H239 520 aa15.19■□□□□ 0.02
CCDC43-202ENST00000457422 CCDC86Q9H6F5 360 aaKnown RBP15.19■□□□□ 0.02
CCDC43-202ENST00000457422 RBFOX1Q9NWB1 397 aaKnown RBP15.19■□□□□ 0.02
CCDC43-202ENST00000457422 EXTL2Q9UBQ6 330 aa15.19■□□□□ 0.02
CCDC43-202ENST00000457422 RASD1Q9Y272 281 aa15.19■□□□□ 0.02
CCDC43-202ENST00000457422 ALG1L2C9J202 215 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 EIF4E2O60573 245 aaKnown RBP15.18■□□□□ 0.02
CCDC43-202ENST00000457422 TACR3P29371 465 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 IL12BP29460 328 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 RBMS1P29558 406 aaKnown RBP15.18■□□□□ 0.02
CCDC43-202ENST00000457422 CDKN2AP42771 156 aaKnown RBP15.18■□□□□ 0.02
CCDC43-202ENST00000457422 DMWDQ09019 674 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 NSDHLQ15738 373 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 EMC4Q5J8M3 183 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 WDR45BQ5MNZ6 344 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 HLA-DQA1Q5Y7H0 255 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 IL20RBQ6UXL0 311 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 JAZF1Q86VZ6 243 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 OR1N1Q8NGS0 311 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 OR6K6Q8NGW6 343 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 ZNF563Q8TA94 476 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 LPAR4Q99677 370 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 WWTR1Q9GZV5 400 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 ZCCHC4Q9H5U6 513 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 MOKQ9UQ07 419 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 OR6C76A6NM76 312 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 GMFGO60234 142 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 ARL6IP5O75915 188 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 UCHL1P09936 223 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 PRKAR1AP10644 381 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 RAB3BP20337 219 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 NPR2P20594 1047 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 NR0B1P51843 470 aaKnown RBP15.18■□□□□ 0.02
CCDC43-202ENST00000457422 CTXN1P60606 82 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 RPS11P62280 158 aaKnown RBP eCLIP15.18■□□□□ 0.02
CCDC43-202ENST00000457422 MZT2BQ6NZ67 158 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 LYPD4Q6UWN0 246 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 ZNF441Q8N8Z8 693 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 LSM14AQ8ND56 463 aaKnown RBP15.18■□□□□ 0.02
CCDC43-202ENST00000457422 DUSP18Q8NEJ0 188 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 ENKURQ8TC29 256 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 PHYHIPQ92561 330 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 DPYSL5Q9BPU6 564 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 ALG12Q9BV10 488 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 NDEL1Q9GZM8 345 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 VN1R1Q9GZP7 353 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 ZNF768Q9H5H4 540 aaKnown RBP15.18■□□□□ 0.02
CCDC43-202ENST00000457422 RNF121Q9H920 327 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 FKRPQ9H9S5 495 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 MOV10Q9HCE1 1003 aaKnown RBP15.18■□□□□ 0.02
CCDC43-202ENST00000457422 COPS7AQ9UBW8 275 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 GNG8Q9UK08 70 aa15.18■□□□□ 0.02
CCDC43-202ENST00000457422 HMX3A6NHT5 357 aa15.17■□□□□ 0.02
CCDC43-202ENST00000457422 C17orf51A8MQB3 221 aa15.17■□□□□ 0.02
CCDC43-202ENST00000457422 K7ESF4 209 aa15.17■□□□□ 0.02
CCDC43-202ENST00000457422 TFECO14948 347 aaPredicted RBP15.17■□□□□ 0.02
CCDC43-202ENST00000457422 GPRIN2O60269 458 aa15.17■□□□□ 0.02
CCDC43-202ENST00000457422 FAM157BP0CG42 384 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms