RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 A8MUA0 341 aa13.74□□□□□ -0.21
LDLR-202ENST00000455727 BLOC1S5-TXNDC5H3BN57 136 aa13.74□□□□□ -0.21
LDLR-202ENST00000455727 TO15178 435 aa13.74□□□□□ -0.21
LDLR-202ENST00000455727 EIF4EP06730 217 aaKnown RBP13.74□□□□□ -0.21
LDLR-202ENST00000455727 SDHAP31040 664 aa13.74□□□□□ -0.21
LDLR-202ENST00000455727 UQCRC1P31930 480 aa13.74□□□□□ -0.21
LDLR-202ENST00000455727 AQP2P41181 271 aa13.74□□□□□ -0.21
LDLR-202ENST00000455727 CCR4P51679 360 aa13.74□□□□□ -0.21
LDLR-202ENST00000455727 STARD6P59095 220 aa13.74□□□□□ -0.21
LDLR-202ENST00000455727 GXYLT1Q4G148 440 aa13.74□□□□□ -0.21
LDLR-202ENST00000455727 HACD4Q5VWC8 232 aa13.74□□□□□ -0.21
LDLR-202ENST00000455727 OVCH1Q7RTY7 1134 aa13.74□□□□□ -0.21
LDLR-202ENST00000455727 EXD3Q8N9H8 876 aa13.74□□□□□ -0.21
LDLR-202ENST00000455727 OR1L3Q8NH93 324 aa13.74□□□□□ -0.21
LDLR-202ENST00000455727 ZPLD1Q8TCW7 415 aa13.74□□□□□ -0.21
LDLR-202ENST00000455727 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.74□□□□□ -0.21
LDLR-202ENST00000455727 Q96M85 177 aa13.74□□□□□ -0.21
LDLR-202ENST00000455727 MOGAT1Q96PD6 335 aa13.74□□□□□ -0.21
LDLR-202ENST00000455727 OR2B2Q9GZK3 357 aa13.74□□□□□ -0.21
LDLR-202ENST00000455727 GNG8Q9UK08 70 aa13.74□□□□□ -0.21
LDLR-202ENST00000455727 A0A0B4J293 547 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 TEX13CA0A0J9YWL9 993 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 FAM240BA0A1B0GVZ2 78 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 A0A1W2PQD3 144 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 DUX1O43812 170 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 SELENOFO60613 162 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 CDKN2AP42771 156 aaKnown RBP13.73□□□□□ -0.21
LDLR-202ENST00000455727 NR4A2P43354 598 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 CSNK1EP49674 416 aaKnown RBP13.73□□□□□ -0.21
LDLR-202ENST00000455727 NKX2-5P52952 324 aaPredicted RBP13.73□□□□□ -0.21
LDLR-202ENST00000455727 CFHR1Q03591 330 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 TBRG1Q3YBR2 411 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 ALG10Q5BKT4 473 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 YOD1Q5VVQ6 348 aaPredicted RBP13.73□□□□□ -0.21
LDLR-202ENST00000455727 LEG1Q6P5S2 330 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 UBE2J2Q8N2K1 259 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 TRMT10AQ8TBZ6 339 aaKnown RBP13.73□□□□□ -0.21
LDLR-202ENST00000455727 DNASE2BQ8WZ79 361 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 DAZLQ92904 295 aaKnown RBP13.73□□□□□ -0.21
LDLR-202ENST00000455727 RNF31Q96EP0 1072 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 SLC41A2Q96JW4 573 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 ADOQ96SZ5 270 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 MARVELD1Q9BSK0 173 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 ALG12Q9BV10 488 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 NDEL1Q9GZM8 345 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 ZNF304Q9HCX3 659 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 WDR70Q9NW82 654 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 DHCR7Q9UBM7 475 aaKnown RBP13.73□□□□□ -0.21
LDLR-202ENST00000455727 COPS3Q9UNS2 423 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 MAGEB4O15481 346 aaPredicted RBP13.73□□□□□ -0.21
LDLR-202ENST00000455727 TRIM3O75382 744 aaPredicted RBP13.73□□□□□ -0.21
LDLR-202ENST00000455727 GSTT2P0CG29 244 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 GSTT2BP0CG30 244 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 PSKH1P11801 424 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 GLB1P16278 677 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 CLDN20P56880 219 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 GPLD1P80108 840 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 LTBQ06643 244 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 EBPQ15125 230 aaKnown RBP13.73□□□□□ -0.21
LDLR-202ENST00000455727 SLC25A35Q3KQZ1 300 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 CEP78Q5JTW2 689 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 ZNF684Q5T5D7 378 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 PYHIN1Q6K0P9 492 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 KCTD20Q7Z5Y7 419 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 JAZF1Q86VZ6 243 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 KMT5CQ86Y97 462 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 GPR135Q8IZ08 494 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 C10orf53Q8N6V4 93 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 OR13C5Q8NGS8 318 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 OR6K6Q8NGW6 343 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 NUDT9Q9BW91 350 aa13.73□□□□□ -0.21
LDLR-202ENST00000455727 FLRT2O43155 660 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 FZD7O75084 574 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 EPXP11678 715 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 FBLP22087 321 aaKnown RBP13.72□□□□□ -0.21
LDLR-202ENST00000455727 EDNRAP25101 427 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 CTXN1P60606 82 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 ZFP69Q49AA0 526 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 SLC6A19Q695T7 634 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 SLC16A9Q7RTY1 509 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 ZNF563Q8TA94 476 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 HAVCR2Q8TDQ0 301 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 SHDQ96IW2 340 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 LPAR4Q99677 370 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 THAP7Q9BT49 309 aaPredicted RBP13.72□□□□□ -0.21
LDLR-202ENST00000455727 WACQ9BTA9 647 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 TTTY10Q9BZA0 68 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 FOXQ1Q9C009 403 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 RXFP3Q9NSD7 469 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 ACOXLQ9NUZ1 547 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 RP1P56715 2156 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 A8MU76 341 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 EIF4E2O60573 245 aaKnown RBP13.72□□□□□ -0.21
LDLR-202ENST00000455727 TSPAN2O60636 221 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 ICOSLGO75144 302 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 TMEM127O75204 238 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 SLC43A1O75387 559 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 TACR3P29371 465 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 IL20RBQ6UXL0 311 aa13.72□□□□□ -0.21
LDLR-202ENST00000455727 PRSS42Q7Z5A4 293 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms