RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 REV1Q9UBZ9 1251 aa14.87□□□□□ -0.03
CCDC90B-202ENST00000455220 SIGLEC7Q9Y286 467 aa14.87□□□□□ -0.03
CCDC90B-202ENST00000455220 HIF3AQ9Y2N7 669 aa14.87□□□□□ -0.03
CCDC90B-202ENST00000455220 COL6A6A6NMZ7 2263 aa14.87□□□□□ -0.03
CCDC90B-202ENST00000455220 M0R082 166 aa14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 MITFO75030 526 aaPredicted RBP14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 EIF1AXP47813 144 aaKnown RBP14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 P2RY4P51582 365 aa14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 AGFG1P52594 562 aaKnown RBP14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 NUP107P57740 925 aa14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 OR2B6P58173 313 aa14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 FXYD6P3P58550 94 aa14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 RPS3AP61247 264 aaKnown RBP14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 H3F3AP84243 136 aa14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 SRYQ05066 204 aa14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 NFATC3Q12968 1075 aa14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 PAQR6Q6TCH4 344 aa14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 ZNF620Q6ZNG0 422 aa14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 PM20D2Q8IYS1 436 aa14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 OR5J2Q8NH18 312 aa14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 ZNF417Q8TAU3 575 aa14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 CPNE4Q96A23 557 aaPredicted RBP14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 RDH12Q96NR8 316 aa14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 ZNF587Q96SQ5 575 aaPredicted RBP14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 SEC14L4Q9UDX3 406 aa14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 B3GALT5Q9Y2C3 310 aa14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 KALRNO60229 2985 aa14.86□□□□□ -0.03
CCDC90B-202ENST00000455220 TRAV27A0A087WT01 109 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 NPIPA2E9PIF3 369 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 NPIPA3F8WFD2 350 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 DLGAP1O14490 977 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 BCKDKO14874 412 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 CXCL13O43927 109 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 EIF1BO60739 113 aaKnown RBP14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 OSMP13725 252 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 GTF2E2P29084 291 aaKnown RBP14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 UQCRC1P31930 480 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 VHLP40337 213 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 C3AR1Q16581 482 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 RFX4Q33E94 735 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 ZBED5Q49AG3 693 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 H1FNTQ75WM6 255 aaPredicted RBP14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 NANOGNBQ7Z5D8 188 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 ADGRE4PQ86SQ3 457 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 KIF18BQ86Y91 864 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 GALNT4Q8N4A0 578 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 VCXQ9H320 206 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 MCCC2Q9HCC0 563 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 CHST11Q9NPF2 352 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 FANCFQ9NPI8 374 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 TIGARQ9NQ88 270 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 IL20Q9NYY1 176 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 CDH10Q9Y6N8 788 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 SHANK1Q9Y566 2161 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 AQP7P3A6NL99 342 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 H0YJX3 145 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 PLPP3O14495 311 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 AKR7A3O95154 331 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 HIST1H2ABP04908 130 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 EDN3P14138 238 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 PTGS2P35354 604 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 RAD23AP54725 363 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 PRPS1P60891 318 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 WLSQ5T9L3 541 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 RPL13AP3Q6NVV1 102 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 HIST3H2AQ7L7L0 130 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 GALNT5Q7Z7M9 940 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 TMEM99Q8N816 258 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 OR51A7Q8NH64 312 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 FANK1Q8TC84 345 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 ZPLD1Q8TCW7 415 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 HIST1H2ACQ93077 130 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 ZHX1-C8orf76Q96EF9 292 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 ZNF845Q96IR2 970 aaPredicted RBP14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 TNFRSF13CQ96RJ3 184 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 GABARAPL3Q9BY60 117 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 ENOPH1Q9UHY7 261 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 CAMK2AQ9UQM7 478 aa14.85□□□□□ -0.03
CCDC90B-202ENST00000455220 ZNF814B7Z6K7 855 aa14.84□□□□□ -0.03
CCDC90B-202ENST00000455220 SMAD9O15198 467 aaKnown RBP14.84□□□□□ -0.03
CCDC90B-202ENST00000455220 ZNHIT1O43257 154 aa14.84□□□□□ -0.03
CCDC90B-202ENST00000455220 RCBTB2O95199 551 aa14.84□□□□□ -0.03
CCDC90B-202ENST00000455220 ESRRGP62508 458 aa14.84□□□□□ -0.03
CCDC90B-202ENST00000455220 ZP4Q12836 540 aa14.84□□□□□ -0.03
CCDC90B-202ENST00000455220 PMS2P3Q13401 168 aa14.84□□□□□ -0.03
CCDC90B-202ENST00000455220 GXYLT1Q4G148 440 aa14.84□□□□□ -0.03
CCDC90B-202ENST00000455220 SMARCD3Q6STE5 483 aa14.84□□□□□ -0.03
CCDC90B-202ENST00000455220 ZGRF1Q86YA3 2104 aa14.84□□□□□ -0.03
CCDC90B-202ENST00000455220 SLC43A2Q8N370 569 aa14.84□□□□□ -0.03
CCDC90B-202ENST00000455220 LRRC75AQ8NAA5 344 aa14.84□□□□□ -0.03
CCDC90B-202ENST00000455220 CPT1CQ8TCG5 803 aa14.84□□□□□ -0.03
CCDC90B-202ENST00000455220 TUBA1CQ9BQE3 449 aa14.84□□□□□ -0.03
CCDC90B-202ENST00000455220 NAA11Q9BSU3 229 aaPredicted RBP14.84□□□□□ -0.03
CCDC90B-202ENST00000455220 PLA2G12AQ9BZM1 189 aa14.84□□□□□ -0.03
CCDC90B-202ENST00000455220 OR52D1Q9H346 318 aa14.84□□□□□ -0.03
CCDC90B-202ENST00000455220 EGLN3Q9H6Z9 239 aa14.84□□□□□ -0.03
CCDC90B-202ENST00000455220 SMPD3Q9NY59 655 aaPredicted RBP14.84□□□□□ -0.03
CCDC90B-202ENST00000455220 TAS2R5Q9NYW4 299 aa14.84□□□□□ -0.03
CCDC90B-202ENST00000455220 ORC6Q9Y5N6 252 aa14.84□□□□□ -0.03
CCDC90B-202ENST00000455220 FAM208BQ5VWN6 2430 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms